Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5391g00018 ATGGAGCATGAAAAAACTCCTGTCCTAGAAGCGAGTTCCATGCGGGAAATAGAGATGACAGTTGACTCCGAAAGAATTGATATTCTTCCTGTGGCAACAGAATCATCTTGCATTTCTGGTTGCCCTTTTTCCAGACAAGAACATAGTCTTGTGGCATCAGAAGAGTCATCAAAGTCGGCAAAGAAACTTTGTGGACTCATAGTATTCTATGCAATGGTTATGCTTGTGGAAATTGTTGGTGGTTTGAAAGCCAACAGCCTAGCTGTTATCAGTGATGCTGCGCACTTGCTTTCGGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCCTCAGGTTGGGAGGCAACTCCACATCAGTCTTTTGGATACAATCGACTTGAAGTTTTGGGTGCTCTCTTATCTGTGCAGTTGATCTGGCTAATATCTGGCTTTTTAATATATGAAGCACTTGGGAGACTTCTTTACAGAAAGGCCAGGGTGAATGGCATGCTCATGCTTTCAATTGCAGCATTTGGATTCGTTCTTAACTTAATCATGGTTTTATGGCTTGGTCATGATCACAGTCATCACCACCATCATCATGGCTGCGGAGACTCTAATCATGATCATGGAAAGGAGGAGCAACATAATAACATAACAGATGAAGAGGAGCTTAGTCTAGTTTCAAGTAGTCCTAGAAAAGGAAATGTCCTGAACATAAATTTGCAGGGGGCCTATCTGCATGTCATGGCTGATCTGATTCAATCTGTCGGGGTGATGATTGCTGGAGCTGTGATATGGGCTAAACCAGATTGGTTAGTCGTTGACCTGCTGTGTACTCTAATATTCTGTGTCATATCTCTGGGAACTACAGTGTCAACGCTCAATAATATTTACGGCATTCTGATGGAGAGGACGCCAAGTGACATCGATATCATGAAGCTGGAAAATGACCTCAAGGGCATCAAGGGAGTGCAAGATATTCACGACTTGCACATTTGGGCCATAACTGTTGGGAAAAATGTTCTTTCTTGTCATGTAGTAGCCGAGCCTGGGATCAGCTTCCCTGATTTGCTCAATAGGATTAGGCATTATTGTGAAAAAACACACAAGATTCATCATGTAACCATACAAATTGAGTAA 1128 0.4246 MEHEKTPVLEASSMREIEMTVDSERIDILPVATESSCISGCPFSRQEHSLVASEESSKSAKKLCGLIVFYAMVMLVEIVGGLKANSLAVISDAAHLLSDIAGFSISLFAVWASGWEATPHQSFGYNRLEVLGALLSVQLIWLISGFLIYEALGRLLYRKARVNGMLMLSIAAFGFVLNLIMVLWLGHDHSHHHHHHGCGDSNHDHGKEEQHNNITDEEELSLVSSSPRKGNVLNINLQGAYLHVMADLIQSVGVMIAGAVIWAKPDWLVVDLLCTLIFCVISLGTTVSTLNNIYGILMERTPSDIDIMKLENDLKGIKGVQDIHDLHIWAITVGKNVLSCHVVAEPGISFPDLLNRIRHYCEKTHKIHHVTIQIE 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5391g00018 375 Pfam Cation efflux family 67 297 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pral5391g00018 375 NCBIfam cation diffusion facilitator family transporter 61 375 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pral5391g00018 375 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 36 375 - -
Pral5391g00018 375 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 302 375 IPR036837 -
Pral5391g00018 375 MobiDBLite consensus disorder prediction 195 220 - -
Pral5391g00018 375 SUPERFAMILY Cation efflux protein transmembrane domain-like 60 299 IPR027469 -
Pral5391g00018 375 Gene3D Cation efflux protein transmembrane domain 59 297 IPR027469 -
Pral5391g00018 375 MobiDBLite consensus disorder prediction 195 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5391g00018 Pral-Chr5391 60357 62516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5391g00018 1 375 Inorganic Solute Cotransporters AT2G29410 50.653 1.84e-121 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5391g00018 K14689 - gmx:100777590 532.332