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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pral5390g00065
ATGGAACTGATGAGAGGTTTAGATAAGGAAATAGAGATGCCATTACCAACCTCTTCAGGCTATAATCCCTCCAATAGGGACTCGTCTTCTTCTCCAACTCTAGCTTCAACAGTAGGCGAAACGAGTAGTGATCAACCTCCTCAAACTTCAGACCACTATCATCTTAATCATCCTCCTCCTTCTCTGCCATCGAACCCACTTCAGCAATTGCAGAGAAACACGAGAGATCCAGATCCGCCAAGCGTAACAGCGATCACAACAATTGCTAGCAGATCAAACCCAGGACCAGCAACAGCGAGGACGATTAGGTACAGAGAATGCTTGAAGAATCATGCGGCGAGCATGGGAGGACACGTAGTGGATGGATGCGGCGAGTTCATGCCAAGTGGAGAAGAAGGCACTCCACAATCCTTGAGATGTGCCGCTTGTGACTGCCACCGCAATTTCCACCGGAAAGAGACCGAAGGTGAACCTCAAACTAATGTTCTCAATTACTACGCCTACCCTCCCAGCAAAAGCAATAACGCACAGAGTAGGATTCTTTCTCCGCAGTTTCCGCCACCCCCTCCTCTTCATCATCATCATCACCATCAACATATGAGATTTTCAGGTGGGTCGTTCCCGCCGTTGATGATGGCCTTCGGCGGAGGCGGCGGGGCGGCGGAGTCTTCAAGCGAAGATCTGAACATGTTTCAGTGTAATGATGTGGGAGGGCAAGGGTCATCAAAGAAGAGGTTTAGGACTAAGTTTAGCCAGGAGCAGAAGGACAGGATGATGGAGTTCGCCGAGAAGTTGGGATGGAGGATCCAGAAACACGACGAACAAGAAGTACAACAGTTTTGTAATCAAGCGGGTGTGAAACGGCAGGTTTTCAAGGTTTGGATGCACAATAACAAACAGGCCATGAAGAAGAAGCAAATCATATAA
927
0.4854
MELMRGLDKEIEMPLPTSSGYNPSNRDSSSSPTLASTVGETSSDQPPQTSDHYHLNHPPPSLPSNPLQQLQRNTRDPDPPSVTAITTIASRSNPGPATARTIRYRECLKNHAASMGGHVVDGCGEFMPSGEEGTPQSLRCAACDCHRNFHRKETEGEPQTNVLNYYAYPPSKSNNAQSRILSPQFPPPPPLHHHHHHQHMRFSGGSFPPLMMAFGGGGGAAESSSEDLNMFQCNDVGGQGSSKKRFRTKFSQEQKDRMMEFAEKLGWRIQKHDEQEVQQFCNQAGVKRQVFKVWMHNNKQAMKKKQII
308
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pral5390g00065
308
NCBIfam
homeobox domain, ZF-HD class
243
300
IPR006455
-
Pral5390g00065
308
Gene3D
-
232
304
-
-
Pral5390g00065
308
ProSiteProfiles
'Homeobox' domain profile.
241
305
IPR001356
GO:0003677
Pral5390g00065
308
PANTHER
ZINC-FINGER HOMEODOMAIN PROTEIN 2
76
300
-
-
Pral5390g00065
308
Pfam
ZF-HD protein dimerisation region
102
154
IPR006456
-
Pral5390g00065
308
NCBIfam
ZF-HD homeobox protein Cys/His-rich dimerization domain
103
153
IPR006456
-
Pral5390g00065
308
ProSiteProfiles
Zinc-finger ZF-HD dimerization-type profile.
104
153
IPR006456
-
Pral5390g00065
308
MobiDBLite
consensus disorder prediction
1
98
-
-
Pral5390g00065
308
MobiDBLite
consensus disorder prediction
66
97
-
-
Pral5390g00065
308
FunFam
Zinc-finger homeodomain protein 2
232
304
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pral5390g00065
Pral-Chr5390
340954
342620
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pral5390g00065
92
307
ZF-HD Transcription Factor Family
AT2G18350
53.571
8.48e-71
218
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
zf-HD
Pral5390g00065
ZF-HD_dimer
1.5e-31
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Pral5390g00065
-
-
qsu:111998832
337.421
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