Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5390g00048 ATGTCTGATTCATACCTCAATCTATGGCTTCTTTCTCTCATTCTAGCCCTCCCCATTATCCTTCTCTTCAGAAGAAAGCAACCCAAGCTTAATCTCCCCCCCGGCCAAATGGGATGGCCTCTTGTTGGGCAAACTATTGGGTACTTGAGGCCACACCCTGCTACGACCATAGGAGAATTCATGGAACAGCATATTGCAAGGTATGGTAAAATCTTCAAGTCGTCATTGTTTGGGGAGCCAGCGATTGTTTCAGCAGATGCAGAGCTGAATAAGTTCATATTTAACAACGAAGGAAAATTGTTTGAATGTAGCTACCCAAAAAGCATTGGCGGAATACTAGGAAAATGGTCCATGTTGGTCGTCGTCGGCGACATGCATAGAGACATGAGAGCTATAGCGCTCAACTTTATGAGCAATGCCATGCTCAGAACAACGATGCTGAAAGACGTGGAGAGGCACGCCCTGCTTGTTCTTAACTCGTGGAAGCAGGATTTTAAATTTTCCGCTCAAGAAGAAGCGAAGAAGTTCACCTTCAACTTGATGGTGAAGAATATCTTGAGCCTCGAACCTGAAACTCCTGAGGCAGAGGCGTTGAAGAAAGCGTACGCCACTTTCATGAAAGGGGTGGTTTCGGCGCCTCTGAACTTACCTGGAACGGCATACCGGAAGGCTTTACAGTCTAGGTTCACCATACTGAAGTTCATAGAGAGGAAAATGGAAGAAAGAAACCAAAACATCAAAGGGGGTGATAAAGGCTTGGACGATGACCTTCTAAGCTGGGTTTTAAAGAATTCAAATCTGACATCAGAACAAGTTCTTGACCTGATTCTAAGCTTGCTTTTTGCTGGGCATGAAACTTCATCCGTAGCCATATCTCTGGCACTTTACTTTTTACCGGCTTGTCCTAGAGCTGTCCAGCAGCTAAGGGAAGAACACAGAGAAATTGCCAGAGCCAAAAGAGAAGCGGGTGATGTGGAATTGACTTGGGATGACTACAGGCGGATGGAGTTTACTCACTGGGTCGTCAACGAAACACTTCGGCTGGGAAACGTGGTGAGATTTCTTCACAGGAAGGCTATCAAGGATATACGGTACAAAGGCTATGACATTCCACGTGGTTGGAAAGTCCTTCCGGTTCTCGCCGCCGTGCATCTTGATCCTTCAAATTTTGACCACCCTCAACTCTTCGATCCATGGAGATGGCAAAACAATGGGAGTCGTGGAGGCAGCACAGGCACGAGCAATAACTTCATGCCGTTTGGAGGAGGGGGGAGATACTGCGCGGGATCAGAGTTGGCGAAGCTAGAAATAGCGATTTTCATCCACCATCTCATCCTCAACTGTGAATGGCAGTTGGCTGAACAAGATCAAGCTTTTGTGTACCCTTTCGTTGATTTTCCTAAAGGCTTACCCATCACGGTCCAACGTCTATCTTTGATTTGA 1443 0.4643 MSDSYLNLWLLSLILALPIILLFRRKQPKLNLPPGQMGWPLVGQTIGYLRPHPATTIGEFMEQHIARYGKIFKSSLFGEPAIVSADAELNKFIFNNEGKLFECSYPKSIGGILGKWSMLVVVGDMHRDMRAIALNFMSNAMLRTTMLKDVERHALLVLNSWKQDFKFSAQEEAKKFTFNLMVKNILSLEPETPEAEALKKAYATFMKGVVSAPLNLPGTAYRKALQSRFTILKFIERKMEERNQNIKGGDKGLDDDLLSWVLKNSNLTSEQVLDLILSLLFAGHETSSVAISLALYFLPACPRAVQQLREEHREIARAKREAGDVELTWDDYRRMEFTHWVVNETLRLGNVVRFLHRKAIKDIRYKGYDIPRGWKVLPVLAAVHLDPSNFDHPQLFDPWRWQNNGSRGGSTGTSNNFMPFGGGGRYCAGSELAKLEIAIFIHHLILNCEWQLAEQDQAFVYPFVDFPKGLPITVQRLSLI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5390g00048 480 Pfam Cytochrome P450 33 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 Gene3D Cytochrome P450 23 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 Coils Coil 301 328 - -
Pral5390g00048 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Pral5390g00048 480 FunFam Cytochrome P450 90B1 22 476 - -
Pral5390g00048 480 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 CDD CYP90-like 64 476 - -
Pral5390g00048 480 SUPERFAMILY Cytochrome P450 24 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5390g00048 480 PANTHER CYTOCHROME P450 26 28 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5390g00048 Pral-Chr5390 236448 240939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5390g00048 24 402 Cytochrome P450 AT3G50660 68.579 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5390g00048 K09587 - gmx:100802498 714.916