Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5390g00041 ATGTCAAAAGCAGTCGGAACAGTGTTGGGAATCGTGGGGCTTGTTATTATTGCCATTGCTTTGTATGCAATTTGCAAGAAAAGAAAGAAGGCTCGTAATTACGAAGATCCTCCTCTTGCACAAGCAATCTGGGAGACAAAAAGTCCGGAACAAGGATACGATGAATTGAAAGTGGTAAAAGAGGCAAGCGAGGGTACATTCATGTACGATGAATTGGCATTAGCGACGAAAGGATTTGCGAAAGAGAACTTGATAGGAGAAGGAGGACTTGGTTACGTGCATAAAGGTGTTTTACCAAATGGAAAGTCTATTGCAGTTAAAACCCTCAAAGAAGGAGGTCCAAATGGACTTGAGGCCTTCAAATCTGAGAGCGAGGCCATCGCTCGTGTTCATCATCGCCACCTCGTGTTGCTCCTCGGATTCTGTGTTTATGGTGGAAAAAGAATGCTCGTTTACGAATTTGTTCCTAATTACAATCTGGAACATCATCTTCATGGAAAAGGGGTGCCTCCCATGAGTTGGTCTCGTAGGATACAGATTGCAATAGGAATTGCCAAAGGGCTTACCTACCTTCACGAAGATTGTGATCCCCGAATAGTCCATCGCAATATCAAAGCAGCTAATGTCCTGATTGACGAAAGCTTTGAGGCCAAAGTGGCAGATTTTGGTTTGGCTAAGGTGGTATCCGATAATAACACTCACGTTTCAACTTGCGTTATGGGAACACTAGGGTACTTAGCTCCAGAATATGCATCGAGTGGAAAGTTGACAGAAAAATCTGATGTTTTCTCGTTTGGGGTAATGCTATTAGAACTTTTGACTGGGAAGCGGCCTATGGATCTCTCACATGCCTTGGATGATACCTTGGTGGACTGGGCTCGACCACTGCTGAATCGAGGGTTGGAAGATGGAAACTTCAGAGAGTTAGTGGACGCATTTTTGGAAAGAAACTACGATAATCAACAAGTTGCTCGCATTGCTGCTTGCGCTGCGGCCAGCATTCGTCATTCTCCCAAAAAACGCCCAACCATGAGACAGATTCTATTAGCTTTGGAGGGGAATGCATCAGAGGAGGATTTGATGGATGCGGAGAAGCCTGGAAATGACATCATTCACAGTGACGAGTGGGCAATTTTGAATCCCTTTGAACGGGAAAGTGATAATCAGAAAGATAATACTACCTCCAATCCTTAA 1194 0.4422 MSKAVGTVLGIVGLVIIAIALYAICKKRKKARNYEDPPLAQAIWETKSPEQGYDELKVVKEASEGTFMYDELALATKGFAKENLIGEGGLGYVHKGVLPNGKSIAVKTLKEGGPNGLEAFKSESEAIARVHHRHLVLLLGFCVYGGKRMLVYEFVPNYNLEHHLHGKGVPPMSWSRRIQIAIGIAKGLTYLHEDCDPRIVHRNIKAANVLIDESFEAKVADFGLAKVVSDNNTHVSTCVMGTLGYLAPEYASSGKLTEKSDVFSFGVMLLELLTGKRPMDLSHALDDTLVDWARPLLNRGLEDGNFRELVDAFLERNYDNQQVARIAACAAASIRHSPKKRPTMRQILLALEGNASEEDLMDAEKPGNDIIHSDEWAILNPFERESDNQKDNTTSNP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5390g00041 397 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 15 365 IPR047117 -
Pral5390g00041 397 FunFam Proline-rich receptor-like protein kinase PERK4 155 361 - -
Pral5390g00041 397 Pfam Protein tyrosine and serine/threonine kinase 82 348 IPR001245 GO:0004672|GO:0006468
Pral5390g00041 397 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 54 154 - -
Pral5390g00041 397 ProSiteProfiles Protein kinase domain profile. 79 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5390g00041 397 SUPERFAMILY Protein kinase-like (PK-like) 64 351 IPR011009 -
Pral5390g00041 397 Gene3D Phosphorylase Kinase; domain 1 41 154 - -
Pral5390g00041 397 CDD STKc_IRAK 85 353 - -
Pral5390g00041 397 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5390g00041 Pral-Chr5390 203688 206494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5390g00041 67 368 Trihelix Transcription Factor Family AT1G70460 57.096 2.04e-121 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5390g00041 PK_Tyr_Ser-Thr 4.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5390g00041 - - pcin:129322297 567.385