Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5390g00025 ATGGCCAAACGTTTGAAGTTTAGAATATGCCGTGTCTTTCAGTCTTGCCGATCCAAAGACCCATCTGTACTACCCTCCAACCCAGTCCCTTGCCTCCTCCCAGTCACACCCACTAAACCTCATCGCTCCTCGCTCCGCAGCCACGTATCGTCTGCCTTTGAATCTGTTGGCTGTGGCTTCCGACCAAGACCCACCCTCTCCGAAGCCGATGAACGCCGCAACGAACCCCAGGACTTCCGATGGGAACAACAAGACAAATGGCACGTCGTCGCCAAGGTATGCGCCCCAGACAACAATACCACATCTCGCCGCAAAATCTACAGCTCCTCAGTCTCCGGTGCCTCCGATGACGACGACGACGACATCTTGCCTCTCCCACCGCCACGTCGTGCGAGGAAGAAGAAAGGACGGGTTAAGAAGAAGAAAACGACACCGAGGTTTCGGGTGAGCACCTCCTCCGCTGACAGCTGTGGCTTGTTTAGCAGCGATGGCCACAACGATATGGACGAAGAAGAGACGGAAACCCTAGTTTCGTCTTCTAGAAGCTTCTCCACAGACTCTTCTTCCGTCGAGTTGAACTCTCACTTGGGGAGTATTTGCGAGACGGCAAATCAGCACCAGGGAGTCAAGAAGACGAAGCCAAAATCAACGAAGAAGAAGAAGAAAAAGTGTAAGAAAAAGAAAGATGGAAGAGCAAGCTTTTCATCGTCGCCGGCGAGGGTGTCGATGCTATTGCGGCTGATACCGTGCAGCGTGGAGGGGAAGGTGAGGGAGAGCTTTGCAGTGGTGAAGAGATCGGAGGATCCTTACGAGGATTTCAGGAGGTCGATGATGGAGATGGTTTTGGAGAAGCAGATTTTTGAGGAGGCGGATTTGGAGCAACTCTTACATTGTTTCTTGTCTCTTAATTCCAGCGAACATCATGGGGTTATTGTCCAGGTTTTCGCTGAGATCTGGCAGGCTTTGTTCACTTCTGCACCAACAACATTTAGAGAATGA 999 0.5155 MAKRLKFRICRVFQSCRSKDPSVLPSNPVPCLLPVTPTKPHRSSLRSHVSSAFESVGCGFRPRPTLSEADERRNEPQDFRWEQQDKWHVVAKVCAPDNNTTSRRKIYSSSVSGASDDDDDDILPLPPPRRARKKKGRVKKKKTTPRFRVSTSSADSCGLFSSDGHNDMDEEETETLVSSSRSFSTDSSSVELNSHLGSICETANQHQGVKKTKPKSTKKKKKKCKKKKDGRASFSSSPARVSMLLRLIPCSVEGKVRESFAVVKRSEDPYEDFRRSMMEMVLEKQIFEEADLEQLLHCFLSLNSSEHHGVIVQVFAEIWQALFTSAPTTFRE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5390g00025 332 MobiDBLite consensus disorder prediction 203 236 - -
Pral5390g00025 332 MobiDBLite consensus disorder prediction 211 229 - -
Pral5390g00025 332 NCBIfam uncharacterized plant-specific domain TIGR01568 260 323 IPR006458 -
Pral5390g00025 332 MobiDBLite consensus disorder prediction 129 146 - -
Pral5390g00025 332 Pfam Transcriptional repressor, ovate 266 323 IPR006458 -
Pral5390g00025 332 ProSiteProfiles OVATE domain profile. 262 321 IPR006458 -
Pral5390g00025 332 MobiDBLite consensus disorder prediction 101 188 - -
Pral5390g00025 332 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 102 324 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5390g00025 Pral-Chr5390 155065 156179 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral5390g00025 Ovate 1.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5390g00025 - - pcin:129284640 476.478