Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5390g00016 ATGGCAAAAAAGAAAAAAGTGACTGATCATAGAGTTTTGAGCTTGCACTTGAAGAAGTGCTCTCACTGCTCATCATCATCACGGCCACAACCAAAACGACCAAAAGCCTCCTTCTCCAAATCCTTACTTTCATCTCTGGAGTGGGACGAACATGCCTTGCACAGTCTGGATTGGGATTCCATCATGAAGGATGGGGGTTTACATGATGACTCTCTTGCTAACGTTTTGAAGAGTACTGTTCCACAATCAAACCCATGTGACCCTCACGTCCCACATCTTCCGGAATTCCCCAACTCTCAGGAGGTCCCTTTTGATCAAGCCCCAGATTTGAGTCTCTCAGATGTTTATATGAGTCAAAATATGGGTTGCAATTACAAACAACTCCTTGATCATTTGGTTCAGCAGTTCAATCATGGCCATAGTTGGCAAAGCAACGGGTTTGATATGATCAAGGAACTTATTCGAGCAGCCGATTGCTTCGACACGAGCCAGCTACAGCTCGCCCAGGTGATATTGGATCGGCTCAATCAACGTCTGCGATCCCCCGTCGGAAAACCCCTCCACAGAGCTGCGTTTTATTTCAAAGACGCTCTCCAGTCTCTTCTCTCCTGTTCGAACCGGACCCCACGTCTTTCTTCCTTAGTGGAAATCGTTCAGAGCATCAGAACCTTCAAAGCTTTCTCAGGAATTTCTCCAATTCCCATGTTCTCCATCTTCACCACCAACCAAGCACTCCTGGAAGCCCTTCACGGATCATCTTTCATGCACATCATTGACTTCGAAATCGGTTTAGGCATTCAATACGCTCCTCTTATGAAAGAGATGGCAGAGAAGTCGGAGTCCTGTAAAATCAACTCGCCAGTCCTTCGAATCACAGCGGTCGTGCCAGAAGAATACGCCGTGGAAAGCAAATTGATCAGGGAGAACCTGAACCAGTTCGCCAGCGATCTCAGGATCCGAGTCCAAATCGAGTTCGTGCTGTTCAGAACCTTCGAAACTTCGTTGCTGAACGCCGTCAAGTTCATGGAGGGAGAGAAGGCCGCCGTTCTGCTAACCCCGACTATCTTCCGCCGGCTGGGATCAACAAAAAACATAGCCGCATTTCTAGGGGATATTCGGAGGGTTTCTCCAAGCGTGGTTGTATTCGTAGACGGCGAAGGGTGGGCTGACGACGCTACAGCGACGTCGTTTCGTCGGAGTGTTGTGAACAGCCTAGAATTCTACTCGGTCGTGTTGGAGTCGTTGGATGCGTCACTTGTGGGAGGGTGTGGGGAATGGATAAGGAGAATAGAAATGCTCCTGTTGCGACCGAAGATATTGGCAGCGGTGGAAAGCGGAGGACGGCGGGTCCCGGCATGGAGGGACATATAA 1371 0.4916 MAKKKKVTDHRVLSLHLKKCSHCSSSSRPQPKRPKASFSKSLLSSLEWDEHALHSLDWDSIMKDGGLHDDSLANVLKSTVPQSNPCDPHVPHLPEFPNSQEVPFDQAPDLSLSDVYMSQNMGCNYKQLLDHLVQQFNHGHSWQSNGFDMIKELIRAADCFDTSQLQLAQVILDRLNQRLRSPVGKPLHRAAFYFKDALQSLLSCSNRTPRLSSLVEIVQSIRTFKAFSGISPIPMFSIFTTNQALLEALHGSSFMHIIDFEIGLGIQYAPLMKEMAEKSESCKINSPVLRITAVVPEEYAVESKLIRENLNQFASDLRIRVQIEFVLFRTFETSLLNAVKFMEGEKAAVLLTPTIFRRLGSTKNIAAFLGDIRRVSPSVVVFVDGEGWADDATATSFRRSVVNSLEFYSVVLESLDASLVGGCGEWIRRIEMLLLRPKILAAVESGGRRVPAWRDI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5390g00016 456 ProSiteProfiles GRAS family profile. 140 456 IPR005202 -
Pral5390g00016 456 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 447 IPR005202 -
Pral5390g00016 456 Pfam GRAS domain family 150 448 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5390g00016 Pral-Chr5390 97666 101257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5390g00016 46 449 GRAS Transcription Factor Family AT4G36710 51.566 3.00e-127 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5390g00016 GRAS 2e-63 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5390g00016 - - qsa:O6P43_033739 575.859