Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5389g00006 ATGACAGGCGGAGGATCGTCGGGGAGGATGCCCACCTCGAAAGAGAGAGAAAACAACAAGAAGAGGGAACGACGCAGAAGGGCGATTGCTGCCCAGATCTATGCCGGCCTTAGAGCGCAGGGGAACTATAAGCTTCCCAAGCACTGTGACAACAACGAGGTCTTAAAGGCTCTCTGTGCTGAGGCTGGTTGGATTGTTGAGGAGGATGGAACTACCTATAGAAAGGGATGCAGGCCACCTCCCACTGAGAATGGAGGAACTTCAGCTAATATCAGTGCTTGTTCCTCCATACAGCCAAGCCCACAATCCTCATCATTCCCTAGTCCTATGCCTTCCTACCATGCTAGCCCGTCTTCATCCTCCTTCCCTAGCCCCACTCGCATTGATGGAAATCCCTCTTC 401 0.5262 MTGGGSSGRMPTSKERENNKKRERRRRAIAAQIYAGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCRPPPTENGGTSANISACSSIQPSPQSSSFPSPMPSYHASPSSSSFPSPTRIDGNPSS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5389g00006 134 MobiDBLite consensus disorder prediction 1 26 - -
Pral5389g00006 134 MobiDBLite consensus disorder prediction 70 134 - -
Pral5389g00006 134 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 129 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pral5389g00006 134 MobiDBLite consensus disorder prediction 83 134 - -
Pral5389g00006 134 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 129 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5389g00006 Pral-Chr5389 55068 56192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5389g00006 9 134 BZR Transcription Factor Family AT4G36780 80.159 2.05e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pral5389g00006 BES1_N 2e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5389g00006 K14503 - vvi:100249673 171.4