Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5385g00016 ATGGCTTGTAGACTCCAAGAAAGTGTCACCAGTGGAAGCATAACCTGCAACGGAAAACCCTTCTCAAAACAAGTGAAGCAAAATATGGGTTACGTTCATCAGAATGATGTCTTCTACCCTCATCTAACAGTCAGTGAGACCCTTGTTTTTACCGTTCTTCTTAGCTTGCCGAATAACCTCTCCAAAGAAGAAAAAGACTCACATGTTGAGGCCATTATGGAAGAGCTTGACCTGACCCATTTTAAGGACACTATAATGGGAGGGCCATCTTTAAGAGTTGTTTCAGGCGGAGAAAGGAAGAGGGTACGTATAGCTCAAGAGCTTTTGACTAACCCAAGTCTGTTACTGGTTGATGAGCCTACTTCAGGTCTTGACTCAACTACAGCCAAAAAGATAGTGTTATCACTGTGTGAGTTAGCAAAAGGTGGAAGGACCATCGTCCTGACTATCCACCAACCTTCTAGCAAGCTATTTTACATGTTTCAGAAGGTTTTGCTGTTATCTGATGGTTATAGCCTTTACTTTGGGAAGAGAGAACATGTGATGGATTACTTCTCCAACATTGGATATGTAGCCATGAATCCTTCGAATTTCATACTTGATCTAGCAAATGATAAGTATATTTCAAATTTTTAA 636 0.4057 MACRLQESVTSGSITCNGKPFSKQVKQNMGYVHQNDVFYPHLTVSETLVFTVLLSLPNNLSKEEKDSHVEAIMEELDLTHFKDTIMGGPSLRVVSGGERKRVRIAQELLTNPSLLLVDEPTSGLDSTTAKKIVLSLCELAKGGRTIVLTIHQPSSKLFYMFQKVLLLSDGYSLYFGKREHVMDYFSNIGYVAMNPSNFILDLANDKYISNF 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5385g00016 211 Pfam ABC transporter 7 122 IPR003439 GO:0005524
Pral5385g00016 211 ProSitePatterns ABC transporters family signature. 94 108 IPR017871 GO:0005524|GO:0016887
Pral5385g00016 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 190 IPR027417 -
Pral5385g00016 211 Gene3D - 1 191 IPR027417 -
Pral5385g00016 211 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 205 - -
Pral5385g00016 211 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 194 IPR003439 GO:0005524
Pral5385g00016 211 Pfam ABC-2 type transporter 151 201 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5385g00016 Pral-Chr5385 125147 125880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5385g00016 11 155 Calmodulin-binding Proteins AT2G36910 28.477 4.28e-09 53.9