Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5385g00013 ATGGATATTCTATTAAAAGTGAAAATTTTCTGCACATTGGCTATTGTTCTTGGGCTAATATGTGCGAAGCATGTTGCATGTTCGAGGCACAGGCAATATCATCCTGGAAGGAAAATGAGTTCTGGGGATAATAATAACGAGGATCTTGTAACCAGCTTTCCTGGTCAGCCTCATGCAGATTTCCAGCACTTTGCTGGCTATGTCACTGTGAACGAAACTAATGGAAGAGCACTCTTTTACTGGTTCTACGAGGCCATCACCAACCCTCAGGAGAAACCCTTAGTCCTTTGGCTTAATGGAGGACCTGGGTGCTCTTCTGTGGGATATGGAGCAACGCAGGAGATTGGTCCTTTTTTAGTGGACAGTGATGGCCAGGGTCTTAAATATAATAACTTCTCATGGAACAGAGAAGCCAATGTTTTATTCGTGGAATCTCCTGTTGGTGTCGGCTTTTCCTACTCAAACACAACCAGTGATTATGAACATCTCGGAGATGACTTAACAGCGAATGATGCTTACAATTTTCTGCACAAGTGGTTTCTCAAGTTTCCATCTTACAGAACCAGGACATTTTACATAGCAGGAGAGAGTTATGCAGGAAAGTATGTTCCTGAGCTTGCTGAGCTCATCGTTGATAGGAATATGGACCCTTCGCTTCATATTGATCTTAAGGGTATCCTGCTGGGTAATCCAGAAACATCTGACGCTGAGGATTGGATGGGTATTGTGGATTATGCTTGGAGCCACGCCGTGATATCAGATGAGACACACAGAGAAATCAGAGAAAGTTGTGACTTCAAAAGCAGTAACCCATGGATTAACCAAACTTGTTGTGATGCTGTGGATGAATTGCTTGCTCAGTACCACAAGATTGATATGTATAGTCTCTATACTCCTGTCTGCTTTGCCACTGCTGCTCGTTCCAATGATCAATCTACAAAAAGCGTCATGAGTTATAAGCGCACATTGAAAATGATGCCTAGGATCATGGGTGGTTTCGATCCATGTTTGGATGATTATGCCACAGCTTTCTATAACAGACCAGATGTTCAGAAGGCGCTTCATGCCAGCGATGGTCATAGCCTTAAGAATTGGAGTATTTGCAACTACAAGATATTCAACAACTGGGAAGATTCAAAGCCATCTGTTATCCCAATTTACAAGAAGCTTATTTCGGCAGGACTTAGAATCTGGGTTTACAGCGGAGACACCGATGGTAGAGTGCCGGTACTGTCCACAAGATACAGCTTAAGCACTCTGAATTTGCGTATCACCAAGCCATGGAGACCATGGTATCACGAGAAAGAGGTAAGCGGGTGGTTTCAAGAATACGAGGGGCTTACTTTTGCCACATTTCGAGGAGCTGGACATGATGTGCCTAGTTTCAAACCAAGCGGTTCGCTTGCATTCTTCTCCTCCTTTCTGCTCGGACAGTCCCCGCCAGAAACTAAATAA 1455 0.4385 MDILLKVKIFCTLAIVLGLICAKHVACSRHRQYHPGRKMSSGDNNNEDLVTSFPGQPHADFQHFAGYVTVNETNGRALFYWFYEAITNPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDSDGQGLKYNNFSWNREANVLFVESPVGVGFSYSNTTSDYEHLGDDLTANDAYNFLHKWFLKFPSYRTRTFYIAGESYAGKYVPELAELIVDRNMDPSLHIDLKGILLGNPETSDAEDWMGIVDYAWSHAVISDETHREIRESCDFKSSNPWINQTCCDAVDELLAQYHKIDMYSLYTPVCFATAARSNDQSTKSVMSYKRTLKMMPRIMGGFDPCLDDYATAFYNRPDVQKALHASDGHSLKNWSICNYKIFNNWEDSKPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSTLNLRITKPWRPWYHEKEVSGWFQEYEGLTFATFRGAGHDVPSFKPSGSLAFFSSFLLGQSPPETK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5385g00013 484 SUPERFAMILY alpha/beta-Hydrolases 45 479 IPR029058 -
Pral5385g00013 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 464 IPR001563 GO:0004185|GO:0006508
Pral5385g00013 484 FunFam Carboxypeptidase 334 479 - -
Pral5385g00013 484 Pfam Serine carboxypeptidase 57 475 IPR001563 GO:0004185|GO:0006508
Pral5385g00013 484 Gene3D - 383 477 - -
Pral5385g00013 484 FunFam Carboxypeptidase 383 477 - -
Pral5385g00013 484 ProSitePatterns Serine carboxypeptidases, serine active site. 193 200 IPR018202 GO:0004185
Pral5385g00013 484 Gene3D alpha/beta hydrolase 44 303 IPR029058 -
Pral5385g00013 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Pral5385g00013 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Pral5385g00013 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Pral5385g00013 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Pral5385g00013 484 FunFam Carboxypeptidase 44 303 - -
Pral5385g00013 484 Gene3D - 336 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5385g00013 Pral-Chr5385 91217 94452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5385g00013 341 478 Calmodulin-binding Proteins AT2G22960 33.813 1.18e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5385g00013 K16297 - qsa:O6P43_012595 791.956