Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5385g00012 ATGGATACTCCATTAAAAATGAAAATTTTCTGCAGATTGGCTCTTGTACTTGTTCTATTATGTGCGAAGCCTGTTGTATCTTCGAGACACAGGCAATATTATAAGGGTGGTCATGGGAGGAAACTGAGTTCTGGGGTTAGTAATGAAGATCTTGTGACCGACTTGCCTGGTCAGCCTCATGCAGATTTCAGGCACTTTGCTGGCTATGTCACAGTGAATGAAACTAACGGAAGAGCACTCTTTTACTGGTTTTATGAGGCCATCACGAATCCTCAAGAAAAACCCTTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCAGTGGGATATGGAGCAACACAGGAGATTGGTCCTTTTTTGGTGGACACTAATGGGCAGGGTCTTAGATTTAATAACTTCTCATGGAACAGAGAAGCCAATGTTTTATTCTTGGAATCTCCTGTTGGTGTCGGCTTTTCCTACTCAAACACAACCAGCGATTATGAACATATTGGAGATGACTTCACAGCTAACGATGCTTACAATTTTCTGCACAAGTGGTTTCTCAAGTTTCCATCTTACAGAACCAGGACATTTTACATAGCAGGAGAGAGTTATGCAGGGAAGTATGTACCTGAGCTTGCTGAGCTCATCGTTGATAGGAACAAGGACCCTTACCTTCACATTGATCTTAAGGGTATCCTGCTTGGGAATCCGGAAACATCTGATGCTGAGGACTGGATGGGTATTGTGGATTATGCTTGGAGCCACGCTGTGGTTTCTGATGAAACTTACGTTCTAATCAGAGAAAGCTGTGACTTCAAAAGTAGTGACCCATGGAAGAACAAAACCTGTTGTGATGCTGTGGATGAAGTTTTCTCACAGTACGGCAAGATTGACATCTATAGCATATATACCTCTGTCTGCTTTGCCAGTACTGCTCGCTCCAATGATGATCAATCCCTCCAAGGCCGACAACGCGTCATGAAATATAAACGTTCGTCCAAAATGATGCCTAGGATCATGGGTGGTTACGATCCATGTCTGGATGATTATGCGAGAACTTTCTATAACAGACCGGATGTTCAGAAGGCACTTCATGCCAGTGATGGTCACAGTCTTAAGAATTGGAGCATTTGCAATGACAAGATGTTCAACGGCTGGGGAGATTCAAAGCCATCTATGATCCCTATTTACAAGAAGCTTATCTCGGCAGGACTTAGAATCTGGGTTTACAGTGGAGACACAGATGGGAGAGTGCCAGTGCTGTCCACAAGATACAGCTTAAGCACTCTGAATTTGCGTATCACCAAGCCATGGACACCATGGTATCACGAGAACGAGGTAAGCGGGTGGTTTCAAGAGCACGAGGGGCTGACATTTGCAACGTTTCGAGGAGCGGGACATGCAGTGCCTTGCTTCAAACCAAGCAATTCACTCGCACTCTTCTCTTCCTTTCTGCTTGGACAATCACCACCTTCTACTAAATAA 1473 0.4453 MDTPLKMKIFCRLALVLVLLCAKPVVSSRHRQYYKGGHGRKLSSGVSNEDLVTDLPGQPHADFRHFAGYVTVNETNGRALFYWFYEAITNPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGQGLRFNNFSWNREANVLFLESPVGVGFSYSNTTSDYEHIGDDFTANDAYNFLHKWFLKFPSYRTRTFYIAGESYAGKYVPELAELIVDRNKDPYLHIDLKGILLGNPETSDAEDWMGIVDYAWSHAVVSDETYVLIRESCDFKSSDPWKNKTCCDAVDEVFSQYGKIDIYSIYTSVCFASTARSNDDQSLQGRQRVMKYKRSSKMMPRIMGGYDPCLDDYARTFYNRPDVQKALHASDGHSLKNWSICNDKMFNGWGDSKPSMIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSTLNLRITKPWTPWYHENEVSGWFQEHEGLTFATFRGAGHAVPCFKPSNSLALFSSFLLGQSPPSTK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5385g00012 490 FunFam Carboxypeptidase 46 305 - -
Pral5385g00012 490 SUPERFAMILY alpha/beta-Hydrolases 49 485 IPR029058 -
Pral5385g00012 490 Gene3D - 389 483 - -
Pral5385g00012 490 FunFam Carboxypeptidase 339 485 - -
Pral5385g00012 490 Gene3D - 342 378 - -
Pral5385g00012 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Pral5385g00012 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Pral5385g00012 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Pral5385g00012 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 206 IPR001563 GO:0004185|GO:0006508
Pral5385g00012 490 FunFam Carboxypeptidase 389 483 - -
Pral5385g00012 490 Pfam Serine carboxypeptidase 59 482 IPR001563 GO:0004185|GO:0006508
Pral5385g00012 490 ProSitePatterns Serine carboxypeptidases, serine active site. 195 202 IPR018202 GO:0004185
Pral5385g00012 490 Gene3D alpha/beta hydrolase 47 305 IPR029058 -
Pral5385g00012 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 51 470 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5385g00012 Pral-Chr5385 80246 83710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5385g00012 347 484 Calmodulin-binding Proteins AT2G22960 32.374 3.98e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5385g00012 K16297 - gmx:100815993 797.734