Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5379g00003 ATGGCTAATCCTCATCTTCGCGCTCTACTACGGTGGCGCAAGTGGGCCAAGAAGGACTGGGCAATAGCCGCTGTTGGCTTCACTCTCACTGTCGTCTTTGCACTTTCTCTCATCTCAGATTCCCGGCGAAGGGTGAATGGTTCCGTAACCAACCCCTCGTTCGGTCTAAGCCAAAATGATGATCTCGTCGATCTGACCCTTCTTCGAAATGCTAAAGATAGAGGCGCTTTTTGCTTGGATGGGAGCTTGCCGGGATACCATTTCCAAAAGGGGTTTGGATCCGGCTCTAACAATTGGCTACTTCACATTGAGGGAGGAGGTTGGTGTAATACGATGTCTTCGTGTTCTCAGCGAAAAATGACTGCTTTGGGATCCTCAAAATATATGGATAGACAAATTCGTTTCTCGGGAATCTTAAGCTCTGACCCTGCGCAGAATCCTGATTTCTTTAGCTGGAACAAGGTTAAGATACGTTATTGTGATGGTGCGTCCCTCGCTGGTCATCCAGAAAACGAGATTAAGAAAGGAAATAAATTATTCTTCAGAGGTCAGCTCATATGGGAAGCACTTATCGATGAACTCTTGTCAATTGGCCTGTCTGAAGCCAAAGAGGCTCTGCTTTCAGGATGCTCTGCTGGAGGATTGGCAACTCTAATACATTGTGATGCCTTTCGAGGACTTCTTCCAAAGGAAGCAACTGTAAAGTGTCTTGCTGATGCGAGCTTCTTCCTTGATGAGAAGGATATTCTTGGCAATAACACCATGAGATCCTTCTATCATGATGTTTTCCAGCTTCAGAGTGTTATGAGGAGCTTGCACAGAGACTGCACTACTGCTATGGAACCATCTAGGTGTTTCTTTCCAGCTGAAATTATGAAAAGGCTGCAGACTCCTGTGTTCCTAGTCCAGCCAGCTTATGACTTCTGGCAGATACAAAATGTTCTGGTACCGGAAGGGTCGGATCCTCAAGGCCACTGGAAAAGATGCAGATTGAGCATTTCCAATTGTGATACTGATCAGATGGATATTCTTCAAGGTTTCCGAAATTCTTTTCTGAAGTCCTTGAGTGAATTCCGCCCTCGAAGGGAGGTGGGACAGTTCATAAATTCTTGTTTTACTCATTGCCAGACTTGGATGTCTGAGACGTGGCATTCAGCCAGTTCTCCTAAAATAAACAAGAAGACCATAGCTGTAGCGGTTGCTGACTGGTTTTTTGACAGAGAAGTGGTGAAACAAATCGACTGCCCATATCCATGCAATCCCACTTGCCATAATATGGATTTCACTGCAATATACTAA 1299 0.4519 MANPHLRALLRWRKWAKKDWAIAAVGFTLTVVFALSLISDSRRRVNGSVTNPSFGLSQNDDLVDLTLLRNAKDRGAFCLDGSLPGYHFQKGFGSGSNNWLLHIEGGGWCNTMSSCSQRKMTALGSSKYMDRQIRFSGILSSDPAQNPDFFSWNKVKIRYCDGASLAGHPENEIKKGNKLFFRGQLIWEALIDELLSIGLSEAKEALLSGCSAGGLATLIHCDAFRGLLPKEATVKCLADASFFLDEKDILGNNTMRSFYHDVFQLQSVMRSLHRDCTTAMEPSRCFFPAEIMKRLQTPVFLVQPAYDFWQIQNVLVPEGSDPQGHWKRCRLSISNCDTDQMDILQGFRNSFLKSLSEFRPRREVGQFINSCFTHCQTWMSETWHSASSPKINKKTIAVAVADWFFDREVVKQIDCPYPCNPTCHNMDFTAIY 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5379g00003 432 Pfam Pectinacetylesterase 57 409 IPR004963 GO:0016787
Pral5379g00003 432 PANTHER NOTUM-RELATED 35 426 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5379g00003 Pral-Chr5379 19992 25329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5379g00003 1 395 Carbohydrate Esterase AT3G09410 58.603 7.10e-178 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5379g00003 K19882 - qsa:O6P43_026533 677.167