LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5378g00007	ATGTCTATCACCATCTTCATGCTGTGTTTGTACCTGAACATAGCTTATTCCGACAAGAACATGAGTGATGTCGGATTCATGTTTGATGGATTCTTCAAGTTGGGAGCGGCCAGTGATCAGGAGCTCAAAAATTCCAACATGTCAACACACGAAATACATGCCGATGGTGGCCGAAGTGAAGCTGCGCAAGTCTTTTACAATCTTCCTCTTCAATTCAAGAATTCCAATACTACTTCTGTCTTCTCTTTCTCCACCACTTTCATCTTTGCAATAGTAGCCACCGATCCTAAATTTCATGGCCATGGACTCGCCTTCGCTATCTCGCCTACTAGATTTATACCTCAAGCTCAGCCAAACCAATATCTTGGCCTCTTCAACGGCACCTCCGATGGTCAAAGTTCCAATCATATTGTAGCAGTAGAGCTCGACACTGACCAGGACTTTCAGTTTGGTGATATTGATGATAACCATCTTGGTATTGATATCAATAGTTTGGAATCTGCCAATCAATCTTCTGCAGGTTATTATACTGATCGTGGTCTCTTCAGAAAGATAGATCTCTCAAGTGGAGAACCGTTTCAGGTTTGGGTTGAATATAATAGTACAGATCAGAAACTCAGTGTTACAATTCATCGAATAAACATGCCTAAACCTGAGACCCCTCTTGTCACACTGAAAAGAGATCTTTCTTCTTATTTCTTTGAGGTTATGTATGTTGGATTCACATCCTCTAGCGGGTCAAATTCATCTCATTATATATTGGGTTGGAGTTTCAGGATGAACGGTCAAGCTCAGGAGATTCATCTTTCTCGCCTTCCTGACATTCCTGGACTTTTAGATCCAAATGACATGGGTGGAGGTGGGAGAGTCCACAAGAAAATGTTGATAACTATATTATCACTAGTGGGTGCTGTTATCTTTCTAATCTTGATCTATGGTGTGGTTATGATTATAAGGAGAAGAAAATTCATTCAAGTTCTGGAAGATTGGCAAATCTTGTATGGGCCTCATAGGTTCACTTACAAGGACTTATTCATTGCAACAAAAGGTTTTAGAGAGGGTCAACTTCTTGGCAGAGGTGGTTTTGGTAGGGTATACAAAGGAATTCTACCATTTTCCAATGTTCAAATTGCAGTGAAAAGAATTTCTCATGATTCAAAACAAGGGATGAAAGAATTCGTGGCAGAAATCTCAACCATCGGCCGTCTCAGGCATCCAAACTTGGTAAGACTTCTTGGTTACTGCAGAAGAAGAAAAGAACTATTCTTAGTCTATGACTATATGCCTAACGGAAGTTTGGACAAGTTCCTTTACCGATTGCCCAACAACAACATACTCAACTGGAAACATAGATTCAAGATCATCAAAGATGTGGCTTCTGCACTCTTATATCTTCACCAGCAATGGGTTCAGGTTGTCGTCCACCGAGACATCAAATCAGCCAATGTACTGATTGACAATGACATGAATGCTAGACTTGGAGATTTTGGCCTGGCCAAGCTATGTGACCATGGAAATGATCCTCAAACATCTCATGTTGCAGGAACTCCAGGCTACATAGACCCAGAAATTGTGCATAGTGGAAAATCAAGCACAGGTACTGATATCTATTCATTTGGGGTTTTGCTGTTAGAGATTGCTTGTGGAAGAAGGCCAGTCGAAACTCAGACTTCACCGGAGAAAGTGTTGTTGATCGAATGGGTTTTGGATTGCTGGGATAAAGGAGACATTTGTGAAGTAGTGGATAGCAGATTAGGAGGTGAATATGTGGTGGATGAAGCTAAATTGGTGCTTACACTTGGCTTGCTTTGTTCACATCCTATTGCTTCAGCTAGGCCTACTATTTCTAGTATTGTGCAATTCTTAGATGGAGATTCTCAGTTGCCTGATTACTTATTGGATTTAATCAAGTCTAGAAATTTCGGTGGTTGGTCTGGTCAAGCCAATTCTTCATTATCCTCTAATTTTCCTACTGCCCAAACTTCTATTGCTTCTTTGACTTTTACAGAACCATTTGCCTCCTCCGGCCGCTAA	2034	0.4095	MSITIFMLCLYLNIAYSDKNMSDVGFMFDGFFKLGAASDQELKNSNMSTHEIHADGGRSEAAQVFYNLPLQFKNSNTTSVFSFSTTFIFAIVATDPKFHGHGLAFAISPTRFIPQAQPNQYLGLFNGTSDGQSSNHIVAVELDTDQDFQFGDIDDNHLGIDINSLESANQSSAGYYTDRGLFRKIDLSSGEPFQVWVEYNSTDQKLSVTIHRINMPKPETPLVTLKRDLSSYFFEVMYVGFTSSSGSNSSHYILGWSFRMNGQAQEIHLSRLPDIPGLLDPNDMGGGGRVHKKMLITILSLVGAVIFLILIYGVVMIIRRRKFIQVLEDWQILYGPHRFTYKDLFIATKGFREGQLLGRGGFGRVYKGILPFSNVQIAVKRISHDSKQGMKEFVAEISTIGRLRHPNLVRLLGYCRRRKELFLVYDYMPNGSLDKFLYRLPNNNILNWKHRFKIIKDVASALLYLHQQWVQVVVHRDIKSANVLIDNDMNARLGDFGLAKLCDHGNDPQTSHVAGTPGYIDPEIVHSGKSSTGTDIYSFGVLLLEIACGRRPVETQTSPEKVLLIEWVLDCWDKGDICEVVDSRLGGEYVVDEAKLVLTLGLLCSHPIASARPTISSIVQFLDGDSQLPDYLLDLIKSRNFGGWSGQANSSLSSNFPTAQTSIASLTFTEPFASSGR	677

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5378g00007	677	SUPERFAMILY	Protein kinase-like (PK-like)	333	636	IPR011009	-
	Pral5378g00007	677	ProSitePatterns	Legume lectins beta-chain signature.	138	144	IPR019825	-
	Pral5378g00007	677	PANTHER	-	46	626	-	-
	Pral5378g00007	677	ProSitePatterns	Protein kinases ATP-binding region signature.	357	380	IPR017441	GO:0005524
	Pral5378g00007	677	Gene3D	-	24	272	-	-
	Pral5378g00007	677	FunFam	Lectin-domain containing receptor kinase A4.3	336	427	-	-
	Pral5378g00007	677	SMART	serkin_6	351	622	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5378g00007	677	SUPERFAMILY	Concanavalin A-like lectins/glucanases	58	276	IPR013320	-
	Pral5378g00007	677	FunFam	L-type lectin-domain containing receptor kinase S.4	428	634	-	-
	Pral5378g00007	677	FunFam	L-type lectin-domain containing receptor kinase V.9	22	268	-	-
	Pral5378g00007	677	Pfam	Legume lectin domain	26	272	IPR001220	GO:0030246
	Pral5378g00007	677	Gene3D	Transferase(Phosphotransferase) domain 1	428	634	-	-
	Pral5378g00007	677	Pfam	Protein kinase domain	352	560	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5378g00007	677	Gene3D	Phosphorylase Kinase; domain 1	336	427	-	-
	Pral5378g00007	677	CDD	lectin_legume_LecRK_Arcelin_ConA	63	262	IPR001220	GO:0030246
	Pral5378g00007	677	CDD	STKc_IRAK	357	624	-	-
	Pral5378g00007	677	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	473	485	IPR008271	GO:0004672\|GO:0006468
	Pral5378g00007	677	ProSiteProfiles	Protein kinase domain profile.	351	632	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5378g00007	Pral-Chr5378	144430	147564	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5378g00007	62	677	Receptor kinase-like Gene Family	AT4G29050	57.395	0.0	736

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Pral5378g00007		Pkinase	4.5e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5378g00007	-		-	pcin:129301411	1090.1