Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5378g00005 ATGTCTATCACCATCTTCGTGCTGTGTTTGTACCTGAACATAGCTTATTCCGACAAGAACAAGAGTGATGTCGGATTCATGTTTGATGGATTCTTCAAGTTGGGAGCGGCCAGTGATCAGGAGCTCAAAAATTCCAACATGTCAGCACACGAAATATATGCCGATGGTGGCCGAAGTGAAGCTGGGCAAGTCTTTTACAATCTTCCTCTTCAATTCAAGAATTCCAATACTACTTCTGTCTTCTCTTTCTCCACCACTTTCATCTTTGCAATAGTAGCCACCCATCCTAAATTTCATGGCCATGGACTCGCCTTCGCTATCTCGCCTACTAGATTTATACCTGAAGCTCAGCCAAACCAATATCTTGGCCTCTTCAACGCCACCTCCGATGGCCAAAGTTCCAATCATATTGTGGCAATAGAGCTTGACACTGACCAGGATTTTCAGCTTGGTGATATTGATGACAACCATCTTGGGATTGATATTGATGGGTTGGACTCCGTCAATAAATCTTCTGCAGGTTACTATACTGATCGTGGTCGTTTCAGAAAGCTAGATCTCTCGAGTGGAGAACCGATGCAGGTTTGGGTTGAATATGATAGTACAGATCAGAAACTCGGTGTCACAATTCATCCAATAAACATGCCTAAACCTGAGACCCCTCTTGTCACGCTGAAAGAAGATCTTTCTTCTTGTTTCTTTGAGTTTATGTATGTTGGATTCACATCCTCTAGCGGGCCAAATTCATCTCATTATATATTGGGTTGGAGTTTCAGGATGAACGGTCAAGCTCAGGAGATTCATCTTTCTCGCCTTCCTGACATTCCTGGACTTTTAGATCCAAATGACATGGGCGGAGGTGGGAGAGTCCACAAGAAAATATTGATAGCTATATTATCACTAGTGGGTGCGGTTATCTTTCTAATCTTGATCTATGGTGTGGTTATGATTGTAAGGAGAAGAAAATTCATTCAAGTTCTTGAAGATTGGCAAATCTTGTATGGGCCTCATAGGTTCACTTACAAGGACTTATTCATTGCAACAAAAGGGTTTAGAGAGGGTCAACTTCTTGGCAGAGGTGGTTTTGGCAGGGTGTACAAAGGAATTCTACCGTTTTCTAATATTCAAATAGCAGTGAAAAGAGTTTCTCATGATTCAAGACAAGGGATGAGAGAATTCATCGCAGAAATCGCGACCATCGGTCGTCTCAGGCATCCAAACTTGGTAAGAATTCTTGGCTACTGCAAAAGGAAGAAAGAACTTTTGTTAGTTTATGACTATATGTCTAATGGAAGTCTAGACAAGTTCCTTTACTGCCTTCCCAACAACGACGACAAACTCAGTTGGAAACAAAGATTCAAGATCATCAAAGATGTGGCATCTGCACTCTTATATCTTCACCAGCGGTGGGTTCAAGTTGTTATCCATAGAGACATCAAACCAGCCAATATACTGATGGACAATGACATGAATGCTAGACTTGGAGATTTTGGCCTCGCCAAGCTATGTGACCACGGAAATAATCCTCAAACATCTCTTGTAGCAGGGACTCCAGGCTATATAGACCCAGAAATTGTGCAGAGTGGAAAATCAAACACATACACCGATATATATTCATTTGGGGTGTTATTACTGGAGATTGCTTGTGGAAGAAGGCCAGTGGAAACTCAGACCTCCCCAGAGAAAGTTTTACTGACTGAATGGGTTATGGATTGTTGGGATAAAGGAGACATTTGTGAGGCCGTTGATAGCAGATTGGGGGATGCATATGAAGTGGATGAAGCTGAATTGGTTCTCAAACTTGGCTTGCTGTGTTCACATCCTATTGCTTCAGCTAGGCCTGCTATTTCTTGTGTGGTGCAATACTTAGATGGAGATTCTCAGTTGCCTGATAACTTATCGGATTTAATCAAGGCTAGAAACTTAAGTGGCTGGTCCGGTCAAGTATGTTCTTCATCATCCTCTGATTTTCCTACTGGGCAAACTTCTATGGCTTCTTTAACTTTAACAGAATCATTTGCCTGCTCCGGACGCTAA 2037 0.4217 MSITIFVLCLYLNIAYSDKNKSDVGFMFDGFFKLGAASDQELKNSNMSAHEIYADGGRSEAGQVFYNLPLQFKNSNTTSVFSFSTTFIFAIVATHPKFHGHGLAFAISPTRFIPEAQPNQYLGLFNATSDGQSSNHIVAIELDTDQDFQLGDIDDNHLGIDIDGLDSVNKSSAGYYTDRGRFRKLDLSSGEPMQVWVEYDSTDQKLGVTIHPINMPKPETPLVTLKEDLSSCFFEFMYVGFTSSSGPNSSHYILGWSFRMNGQAQEIHLSRLPDIPGLLDPNDMGGGGRVHKKILIAILSLVGAVIFLILIYGVVMIVRRRKFIQVLEDWQILYGPHRFTYKDLFIATKGFREGQLLGRGGFGRVYKGILPFSNIQIAVKRVSHDSRQGMREFIAEIATIGRLRHPNLVRILGYCKRKKELLLVYDYMSNGSLDKFLYCLPNNDDKLSWKQRFKIIKDVASALLYLHQRWVQVVIHRDIKPANILMDNDMNARLGDFGLAKLCDHGNNPQTSLVAGTPGYIDPEIVQSGKSNTYTDIYSFGVLLLEIACGRRPVETQTSPEKVLLTEWVMDCWDKGDICEAVDSRLGDAYEVDEAELVLKLGLLCSHPIASARPAISCVVQYLDGDSQLPDNLSDLIKARNLSGWSGQVCSSSSSDFPTGQTSMASLTLTESFACSGR 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5378g00005 678 PANTHER - 46 627 - -
Pral5378g00005 678 Gene3D Transferase(Phosphotransferase) domain 1 428 639 - -
Pral5378g00005 678 FunFam L-type lectin-domain containing receptor kinase V.9 23 263 - -
Pral5378g00005 678 SUPERFAMILY Protein kinase-like (PK-like) 333 634 IPR011009 -
Pral5378g00005 678 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
Pral5378g00005 678 CDD STKc_IRAK 357 625 - -
Pral5378g00005 678 FunFam L-type lectin-domain containing receptor kinase S.4 428 636 - -
Pral5378g00005 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Pral5378g00005 678 Pfam Legume lectin domain 26 272 IPR001220 GO:0030246
Pral5378g00005 678 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Pral5378g00005 678 Pfam Protein kinase domain 352 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5378g00005 678 ProSiteProfiles Protein kinase domain profile. 351 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5378g00005 678 SMART serkin_6 351 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5378g00005 678 CDD lectin_legume_LecRK_Arcelin_ConA 59 262 IPR001220 GO:0030246
Pral5378g00005 678 FunFam Lectin-domain containing receptor kinase A4.3 336 427 - -
Pral5378g00005 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 57 265 IPR013320 -
Pral5378g00005 678 Gene3D - 25 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5378g00005 Pral-Chr5378 82768 84979 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5378g00005 62 678 Receptor kinase-like Gene Family AT4G29050 56.661 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral5378g00005 Pkinase 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5378g00005 - - pcin:129301411 1086.63