Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5378g00004 ATGAATCCATTCTCTTCAAACCAGAAAATGGAAACTTCCAAAGTTTCAAGGAATCCCACCATGTCTATCACCATTTTCTTGCTGTATTTGTCCCTGAACATAGCATATTCAGACAACAAGAACACAAGTGATGTCGAATTCTTGTTTGATGGATACTTCAAGTTGGGAGCAGGCAGTAATCAAGAACTCGAAGATTCCAACATGTCAGCAAGTGTAATATATGCCGATGGTGGCCTAAGTGAAGCCGGGCAAGTCTTTTACAATCTTCCTCTTCCATTCAAGAATTCCAATACTACTCCTGTCGTCTCTTTCTCCACCACTTTTATCTTTGCAATAGTAGCCACCGATCCTCAATTTCTCGGCCATGGACTCGCCTTCGCTATCTCGCCTACCAAGGGTATTCCTGGAGCTCAGCCAAACCAATATCTTGGCCTGTTCAACGCCACCTCCAATGGTGAAAGTTCCGATCATATTGTGGCAATAGAGCTTGACACTGACCAGGATTTTCAATTTGGTGATATGGATGATAACCATCTCGGGATTGATATTAATGGGTTGGACTCCGTCAATAAATCTTCTGCAGGTTACTATACTGATCATGGTCTTTTCAGACAGATAGATCTTACGAGTGGAGAACCGTTTCAGGTTTGGGTTGAATATAATAGTACAGATCAGAAACTCAGTATTACAATTCATCCAATAAACATGCCTAAACCTGAGACCCCTCTTGTCACACTGAAAAGAGATCTTTCTGCTTATTTCTTTGAGTTTATGTATGTTGGATTCACATCCTCTACCGGGTCAAATTCATCTCATTATATATTGGGTTGGAGTTTCAGGATGAATGGTCAAGCTGAGGAGATTAAACTTTCTCGCCTTCCTGACATTCCTGGAGTAATTTTAGATCCAAATGAAAGGGTCGGGAAAGGAGACAAGAAAATGTTGATAATTATATTATCATCATCAGCAAGTGCAGTTATCCTTCTAGTCTTGATTATTTATGGTGTGCTTTTGATTGTACGGAGGAGAAAATTCATTCAAGTTGTTGAAGAATGGCAAGTCTTGTATGGGCCTCATAGGTTTACCTACAAGGACTTGTTCGTTGCAACAAGAGGGTTTAGAGAGAGCCAACTTCTTGGAAGAGGAGGTTTTGGAAGAGTATACAGGGGAATTCTCCCATTGTCCAATGTTCAAATTGCAGTGAAAAGAATTTCTCATGATTCAAAACAAGGGATGAGAGAATTTGTGGCAGAAATCTCAACTATCGGCCGTCTCAGGCATCCAAACTTGGTGAGACTTCTTGGCTATTGTAGAAGAGGAAAAGAACTATTCTTAGTTTATGACTATATGCCTAATGGAAGTCTAGACAAGTTCCTTTACCGCCTGCCCAACAACAACACACTCGACTGGAAACAAAGGTTCAAGATCATCAAAGATGTGGCTTCTGCACTCTTATATCTTCATCACCAATGGGTTCAAGTTGTTATCCACAGAGACATCAAGCCAGCCAATATACTAATGGACAACAACATGAATGCTAGACTCGGAGATTTTGGTCTGGCTAAGTTATGTGACCATGGAAATGATCCTCAAACATCTCTTGTAGCAGGAACTCCAGGCTATATGGACCCAGAAATTGTGCAAAGAGGAAAATCAAACACATATACCGATATATATTCATTTGGGGTGTTGTTATTGGAGATTGCTTGTGGAAGAAGGCCGGTTGAAACTCAGACCTCACCGGAGAAAGTTTTGCTGATGGAATGGGTTATGGATTGTTGGGATCAAGGAGACATTTGTGAAGCAGTTGATAGCAGATTGGGGGATGCATATGAAGTGGATGAAGCTGAATTGGTTCTCAAACTTGGCTTGCTATGTTCACATCCTATTGTTTCAGCTAGGCCTACGTTATCTAGTATTGTGGAATTCTTAGATGGAGATTCTCAGTTGCCTGACAACTTGTTGGATTTAATCAAGTCCAGAAATTTAGGTGGCTGGTCCCGTCGAGCATGTTCTTTATTATCCTCTAATTTTCCTATTAGCCATGCTTCTATTGCTTATTTGACTTTCACGGAACCATTTGCCTCCTCCGGCCGCTGA 2100 0.4105 MNPFSSNQKMETSKVSRNPTMSITIFLLYLSLNIAYSDNKNTSDVEFLFDGYFKLGAGSNQELEDSNMSASVIYADGGLSEAGQVFYNLPLPFKNSNTTPVVSFSTTFIFAIVATDPQFLGHGLAFAISPTKGIPGAQPNQYLGLFNATSNGESSDHIVAIELDTDQDFQFGDMDDNHLGIDINGLDSVNKSSAGYYTDHGLFRQIDLTSGEPFQVWVEYNSTDQKLSITIHPINMPKPETPLVTLKRDLSAYFFEFMYVGFTSSTGSNSSHYILGWSFRMNGQAEEIKLSRLPDIPGVILDPNERVGKGDKKMLIIILSSSASAVILLVLIIYGVLLIVRRRKFIQVVEEWQVLYGPHRFTYKDLFVATRGFRESQLLGRGGFGRVYRGILPLSNVQIAVKRISHDSKQGMREFVAEISTIGRLRHPNLVRLLGYCRRGKELFLVYDYMPNGSLDKFLYRLPNNNTLDWKQRFKIIKDVASALLYLHHQWVQVVIHRDIKPANILMDNNMNARLGDFGLAKLCDHGNDPQTSLVAGTPGYMDPEIVQRGKSNTYTDIYSFGVLLLEIACGRRPVETQTSPEKVLLMEWVMDCWDQGDICEAVDSRLGDAYEVDEAELVLKLGLLCSHPIVSARPTLSSIVEFLDGDSQLPDNLLDLIKSRNLGGWSRRACSLLSSNFPISHASIAYLTFTEPFASSGR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5378g00004 699 Gene3D Transferase(Phosphotransferase) domain 1 450 656 - -
Pral5378g00004 699 CDD lectin_legume_LecRK_Arcelin_ConA 80 283 IPR001220 GO:0030246
Pral5378g00004 699 FunFam Lectin-domain containing receptor kinase A4.3 358 449 - -
Pral5378g00004 699 FunFam L-type lectin-domain containing receptor kinase V.9 43 289 - -
Pral5378g00004 699 ProSiteProfiles Protein kinase domain profile. 373 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5378g00004 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 79 299 IPR013320 -
Pral5378g00004 699 FunFam L-type lectin-domain containing receptor kinase S.4 450 656 - -
Pral5378g00004 699 ProSitePatterns Protein kinases ATP-binding region signature. 379 402 IPR017441 GO:0005524
Pral5378g00004 699 SMART serkin_6 373 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5378g00004 699 Pfam Protein kinase domain 374 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5378g00004 699 Pfam Legume lectin domain 65 293 IPR001220 GO:0030246
Pral5378g00004 699 PANTHER - 70 648 - -
Pral5378g00004 699 Gene3D - 45 295 - -
Pral5378g00004 699 CDD STKc_IRAK 379 646 - -
Pral5378g00004 699 Gene3D Phosphorylase Kinase; domain 1 358 449 - -
Pral5378g00004 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Pral5378g00004 699 SUPERFAMILY Protein kinase-like (PK-like) 355 653 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5378g00004 Pral-Chr5378 45197 47352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5378g00004 46 699 Receptor kinase-like Gene Family AT4G29050 55.656 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral5378g00004 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5378g00004 - - pcin:129301411 1042.72