Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5376g00005 ATGGGACGATTAGAGCCTATAGTGGCTATGCTGGTTCTTCAGTTCACTTATGCAGGCCTTTCTCTCAGTACCAGAGTCGCTTTAATACAAGGCTTAAGCCCTCGAGTTTTTGTGCTCTATCGACAAGCTATAGCTACTACCGTTCTTGCCCCCATTGCCTATTTCTCAAGAAGAAAATCCGGCTCCTGTTCGTTGAGTTTAAGGAGTTTCACCTTGTTGTTCTTGTCCTCGCTTATAGGTGTTACGATCAACCAGAATGTTTATTTCGAAGGTTTACATTTGGCTTCTTCATCAATTGCAAGTGCTATGGCAAATCTTATTCCAGCCGTCACATTCATAATTGCTGTTTTTGCGGGAATGGAGAGAGTGAATATTCGGAGCCCGAGAAGCGTAGCAAAGATAGCAGGGACCTTGATGTGCGTAAGCGGAGCCGTGTCCATGGCATTGCTAAGAGGTCCAAAGCTATTAAACTCAACTCTGCTGCCAAGACCAGTAATGGAGTCCGGAGGTGATCAGAGCTGGTTGCTGGGTTGTCTCTTTCTGTTTGGAAGCTGTTGTTTATGGTCTATTTGGCTGATTTTGCAGGTTCCGGTGTCGGCGAGCCACCCAGATCACATATCTTCGTCCGCTTGGATGTGTTTTATGGCAACACTGCAATCAGCAGCACTTACTCTGGTCTTGGAACGAGACCCTCAAACATGGAAGATCCATTCAGTTCTTGAACTGGCCTGCTGTGTATACTCAGGAGTCATAGGATCTGCAGTGTCGTTCTTTATTCAGGCATGGTGCATTTCACGGAGAGGTCCTCTCTTTTCTGCAATGTTCAATCCTCTGTGCACAGTGATTGTGACTGTATTCGCTGCGTTATTTCTTCACGAAGAGATCTACGCTGGAAGCTTGATAGGAGCAGCGGGAGTGATAATGGGGTTGTATGTTGTGCTGTGGGGTAAGGCTGAAGAAGTTGGTGAGACGGCAGAAGATCCAACATTGAAAATTGATATTGATGAAACATCACATGATGATACGATGAATATAGTGAAAGATGAATCGTTTGATGAGAAAGCATGTTGCTGTAAAATTGATTTGAAGGAACCCCTCCTCTCTGATAAAAAAAATCTTCAACCGCATTCTTAA 1134 0.4462 MGRLEPIVAMLVLQFTYAGLSLSTRVALIQGLSPRVFVLYRQAIATTVLAPIAYFSRRKSGSCSLSLRSFTLLFLSSLIGVTINQNVYFEGLHLASSSIASAMANLIPAVTFIIAVFAGMERVNIRSPRSVAKIAGTLMCVSGAVSMALLRGPKLLNSTLLPRPVMESGGDQSWLLGCLFLFGSCCLWSIWLILQVPVSASHPDHISSSAWMCFMATLQSAALTLVLERDPQTWKIHSVLELACCVYSGVIGSAVSFFIQAWCISRRGPLFSAMFNPLCTVIVTVFAALFLHEEIYAGSLIGAAGVIMGLYVVLWGKAEEVGETAEDPTLKIDIDETSHDDTMNIVKDESFDEKACCCKIDLKEPLLSDKKNLQPHS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5376g00005 377 Pfam EamA-like transporter family 7 127 IPR000620 GO:0016020
Pral5376g00005 377 Pfam EamA-like transporter family 176 314 IPR000620 GO:0016020
Pral5376g00005 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 149 - -
Pral5376g00005 377 PANTHER WAT1-RELATED PROTEIN 5 324 IPR030184 GO:0016020|GO:0022857
Pral5376g00005 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 212 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5376g00005 Pral-Chr5376 53013 55126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5376g00005 1 376 Nodulin-like Gene Family AT4G30420 53.608 2.59e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5376g00005 - - mnt:21405797 489.96