Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5376g00002 ATGCAAAATCCCAGGTCAGAGAAGCTAGAATTTCTCCAGAAATGGATGGAGGGTATGGGAAAATTCACGTCCCTTAAGAAGAACATGAGCTTGTTGGAGAGGAAGAAGGCCATAAAAGTGTCAGCAGATTTAGCCATGGCTTCCACCAGAACTGAAAGCAAGTGTTGGAGCCGAGCCCTCATTGCCAATATTGCTTCCAGAGACCATAACAGCAAAGTCCTGACGGAGCACGTAATAGGCTCCTCGCAGTGCTTAAGGCTAAGAAAGGCTTTCACTTCTTCTTCTTCTTCTTCTTCTTCATTTTCTCAGCTTAAGAACAAGAGGATGCTTAATAGAACCAGGAAGATCATGAAGAGAAGGCGCCGTACAGTTCGTAGTAGAGTGAAGAAAGTAGTGATGGCGGATTCTATTGCAAGGAGGCTGGTCCAAAAGAGAACAGAAATGCTAAAGAGGCTTGTTCCAGGTGGCGATCTTATGGACGATGATGTGTCCTTGATTGAAGAAACCCTAGATTATATTCAATCCCTCCGATCTCAGGTTCAAGCAATGCGCTGTCTTCTCGCCACTTCCCAGCTCATGAAATGTTCCTAA 591 0.4501 MQNPRSEKLEFLQKWMEGMGKFTSLKKNMSLLERKKAIKVSADLAMASTRTESKCWSRALIANIASRDHNSKVLTEHVIGSSQCLRLRKAFTSSSSSSSSFSQLKNKRMLNRTRKIMKRRRRTVRSRVKKVVMADSIARRLVQKRTEMLKRLVPGGDLMDDDVSLIEETLDYIQSLRSQVQAMRCLLATSQLMKCS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5376g00002 196 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 10 187 IPR044660 GO:0006355
Pral5376g00002 196 CDD bHLH_AtIBH1_like 140 187 IPR044549 GO:0006355
Pral5376g00002 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 184 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5376g00002 Pral-Chr5376 11991 13086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5376g00002 1 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 38.462 1.17e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5376g00002 - - pcin:129309973 254.988