Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5375g00022 ATGGCTCTCAAAATGATAGCAGTGTTGGCAATGGGACTCGCCATCTTGAGCCTTTTCTCAGTGGCTTCTGCCATTTCTGGAACTGCCACCTTTTACACTGTCTATGTTCCTTCTGCATGCAATGGATTTCAAAACGATGGAGTTATGACCGCCGCGGCGAGCGACTCTCTCTGGGACAACGGAGCTGCATGTGGAAGAAAGTACAGAGTGAGGTGCGCCAGTGGTACCAACCAAGGCGTGGCTAACCCTTGCCGGGGTGGAGCCGTCACAGTCAAGATTGTCGATCGCTGCCCTCCTCCGGCATGCAGAGGAACCATCGATCTCTCCCGTGAAGCTTTCTCTGCCATCGCCGACCCCAAAGAAGGAAAAATCAACATTGAATACACCCAGTAA 393 0.5242 MALKMIAVLAMGLAILSLFSVASAISGTATFYTVYVPSACNGFQNDGVMTAAASDSLWDNGAACGRKYRVRCASGTNQGVANPCRGGAVTVKIVDRCPPPACRGTIDLSREAFSAIADPKEGKINIEYTQ 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5375g00022 130 CDD DPBB_EG45-like 25 129 - -
Pral5375g00022 130 Gene3D - 24 130 IPR036908 -
Pral5375g00022 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 130 IPR007112 -
Pral5375g00022 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 130 IPR044206 GO:0009627|GO:0048046
Pral5375g00022 130 FunFam Barwin-related endoglucanase 24 130 - -
Pral5375g00022 130 SUPERFAMILY Barwin-like endoglucanases 15 130 IPR036908 -
Pral5375g00022 130 SMART dpbb_1 50 128 IPR007112 -
Pral5375g00022 130 Pfam Lytic transglycolase 50 128 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5375g00022 Pral-Chr5375 249865 250488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5375g00022 49 121 Expansin Gene Family AT2G45110 37.662 1.03e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5375g00022 - - aew:130796557 185.652