Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5375g00021 ATGACTCTAAGCATGAAAGCAGTGCTAGTCATGGGGCTTGCCATCTTGAGCCTTTTCTCAGTGGCTTCTGCTATTTCTGGAACTGCCACCTTTTACACTGTCTATGTTCCCTCGGCATGTTATGGATTTCAAGATCAAGGGACTATGATCGCAGCAGCAAGCGACCCAATCTATAACAATGGAGCTGCATGTGGAAGAATGTACAGAGTGAGGTGCACGGGTGGCACCAACAGTGTGCCTAATCCTTGCAAGGCCGGAACGGTCACCGTCAAGGTTGTCGACCGCTGCCCCTCGCCGGGATGCCGAGCAACCTTGGACCTCTCTCGGGAAGCTTTCTCTCGTATTGCTAACCCTGACGCTGGAAAAGTCAACATTGACTATGTCCCGGTCTGA 393 0.5165 MTLSMKAVLVMGLAILSLFSVASAISGTATFYTVYVPSACYGFQDQGTMIAAASDPIYNNGAACGRMYRVRCTGGTNSVPNPCKAGTVTVKVVDRCPSPGCRATLDLSREAFSRIANPDAGKVNIDYVPV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5375g00021 130 SUPERFAMILY Barwin-like endoglucanases 15 130 IPR036908 -
Pral5375g00021 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 130 IPR007112 -
Pral5375g00021 130 Gene3D - 17 130 IPR036908 -
Pral5375g00021 130 CDD DPBB_EG45-like 25 128 - -
Pral5375g00021 130 FunFam Barwin-related endoglucanase 24 129 - -
Pral5375g00021 130 SMART dpbb_1 50 127 IPR007112 -
Pral5375g00021 130 Pfam Lytic transglycolase 51 127 IPR009009 -
Pral5375g00021 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 128 IPR044206 GO:0009627|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5375g00021 Pral-Chr5375 244496 246750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5375g00021 27 130 Expansin Gene Family AT2G40610 33.333 1.86e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5375g00021 - - aew:130796557 197.978