Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5375g00020 ATGGCTCTCAACATGAAAGTAGTGTTAGTGATGGGGTTTGCCATTTTGAGCCTTTTCTCAGTGGCTTCTGCCATTTCTGGAACTGCCACCTTTTACACTGTCTATGTTCCCTCGGCATGTTATGGATTTCAAGATCAAGGGACTATGATCGCAGCAGCAAGCGACCCAATCTATAACAATGGAGCTGCATGTGGAAGAATGTACAGAGTTACCTGCACAAGTGGCACCAACAGTGTGCCGAATCCTTGCAAGGCCGGAAGCGTCACAGTCAAGGTTGTCGACCGCTGCCCTTCGCCGGGATGCCAAGCAACCTTGGACCTCTCTCAGGAAGCTTTCTCTCTTATTGCTAACCCTGACGCTGGAAAAGTCAACATTGACTATGTCCAGGTCTGA 393 0.4911 MALNMKVVLVMGFAILSLFSVASAISGTATFYTVYVPSACYGFQDQGTMIAAASDPIYNNGAACGRMYRVTCTSGTNSVPNPCKAGSVTVKVVDRCPSPGCQATLDLSQEAFSLIANPDAGKVNIDYVQV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5375g00020 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 129 IPR044206 GO:0009627|GO:0048046
Pral5375g00020 130 Pfam Lytic transglycolase 51 127 IPR009009 -
Pral5375g00020 130 SMART dpbb_1 50 127 IPR007112 -
Pral5375g00020 130 CDD DPBB_EG45-like 25 128 - -
Pral5375g00020 130 FunFam Barwin-related endoglucanase 24 129 - -
Pral5375g00020 130 Gene3D - 18 130 IPR036908 -
Pral5375g00020 130 SUPERFAMILY Barwin-like endoglucanases 14 130 IPR036908 -
Pral5375g00020 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 130 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5375g00020 Pral-Chr5375 234615 237043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5375g00020 27 130 Expansin Gene Family AT2G40610 34.127 7.30e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5375g00020 - - aew:130796557 201.06