Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5375g00017 ATGGCTCTCAAAATGAACGCAGTGTTAGTGATGGGGCTTGCCATCTTGAGCCTTTTCTCAGTGGCTTCTGCTATTTCTGGAACTGCCTCCTATTACACTCAATATACTCCATCGGCATGCTATGGAAATCAAGATGAAGGGACTATGATAGCTGCAGCAAGCGACCCAATCTATAACAATGGAGCCGCATGTGGAAAGATGTACAAAGTTACCTGCACAAGTAGCACCAACAGTGTGCCGGCATGCAAGGGAGGAAGCGTCACCGTCAAGATTGTCGATCGCTGCCCTTCACCGGGATGCCGGGCAACCTTGGATCTCTCTCAGGAAGCTTTCTCCACCATTGCTAACACTGACGCAGGAATAATCAACATTGACTACGTCCAGGTCTGA 390 0.4897 MALKMNAVLVMGLAILSLFSVASAISGTASYYTQYTPSACYGNQDEGTMIAAASDPIYNNGAACGKMYKVTCTSSTNSVPACKGGSVTVKIVDRCPSPGCRATLDLSQEAFSTIANTDAGIINIDYVQV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5375g00017 129 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 129 IPR007112 -
Pral5375g00017 129 FunFam Barwin-related endoglucanase 24 128 - -
Pral5375g00017 129 Pfam Lytic transglycolase 51 126 IPR009009 -
Pral5375g00017 129 SUPERFAMILY Barwin-like endoglucanases 15 129 IPR036908 -
Pral5375g00017 129 CDD DPBB_EG45-like 25 127 - -
Pral5375g00017 129 Gene3D - 18 129 IPR036908 -
Pral5375g00017 129 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 3 128 IPR044206 GO:0009627|GO:0048046
Pral5375g00017 129 SMART dpbb_1 50 126 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5375g00017 Pral-Chr5375 214952 216566 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5375g00017 49 128 Expansin Gene Family AT2G45110 33.333 7.53e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5375g00017 - - ahf:112743758 185.652