Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5375g00012 ATGGGATCAGGAAGCTTTGTGTGGAGTTTAACAAAGAAATTTGTCACATTTGGGCTCATTACTGTCACAGTAACAGATCGTTATGTGACCATTGTTCCAGTTCGTGGTGGCTCGATGTCTCCCACATTTAATCCTAAAGTCAGCTCTTTGGTGGGAAATATTTCTGATGACTATGTCTTGGTTGAGAAATTTTGTCTTGGAAAATATAAGTTTTCCCGTGGTGATGTAGTGGTATTCCGCTCCCCCTTGAATTACAAGGAGACACACATAAAGAGAATTGTTGCATTACCTGGTGAGTGGTTTGGTGCTCATCGTAACTATGATGTGCTGAAGGTTCCAGAAGGACATTGTTGGGTTGAGGGAGACAATGCAGCTTCCAGCCTGGATTCAAACTCATTTGGTCCTATTCCTTTGGGTTTAGTTCGAGGAAGGGTGACCCACGTTGTATGGCCTCCTCAAAGAATGGGCGCGGTAAAGAAGACCCCACCGGAAGGAATTTCTTCTTAA 507 0.4379 MGSGSFVWSLTKKFVTFGLITVTVTDRYVTIVPVRGGSMSPTFNPKVSSLVGNISDDYVLVEKFCLGKYKFSRGDVVVFRSPLNYKETHIKRIVALPGEWFGAHRNYDVLKVPEGHCWVEGDNAASSLDSNSFGPIPLGLVRGRVTHVVWPPQRMGAVKKTPPEGISS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5375g00012 168 Pfam Signal peptidase, peptidase S26 11 99 IPR019533 GO:0004252|GO:0006465
Pral5375g00012 168 Pfam Signal peptidase, peptidase S26 109 150 IPR019533 GO:0004252|GO:0006465
Pral5375g00012 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral5375g00012 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral5375g00012 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral5375g00012 168 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Pral5375g00012 168 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Pral5375g00012 168 Gene3D Umud Fragment, subunit A 25 161 - -
Pral5375g00012 168 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 164 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Pral5375g00012 168 FunFam Mitochondrial inner membrane protease subunit 25 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5375g00012 Pral-Chr5375 184737 187760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5375g00012 39 162 MADS-box Gene Family AT1G29960 39.231 5.39e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5375g00012 K09648 - gmx:100527429 285.034