Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5375g00010 ATGCTTTCGAGATCTTGTTTAGACCTATTGAGTCTGGTTTCGGTCGATGATTACCGAGCACTGTGTCAGATCCCGAGAGTCTCGACGGTGCCGGGAGTTGTATCAAAATTCGACGCCGCCGAAGACGACCATGCCGACGCTGGGTCCGGATCCGACGAAGTCGTTTCGTCCGGGTCGCCAGAGCGCAGGATCATAGTCGCGAACCAGTTGCCGATACGGGCTTATCGGGATGTGAACACGAAGAAATGGAGTTTCGAATTCGATAGTGATAGTTTGGTGCTGCAGCTCAAAGACGGATTACCCTCCGACGTCGACGTTTTGTACGTGGGCTCCTTGAAGGTCGAGATCGACCCGTCGGAGCAAGACGAAGTGGCGCAAGTTTTGCTTGAGAAGTTTCAGTGCGTACCAACTTTCTTGCCCTCTGAAATTCACAATAAGTACTACCATGGCTTCTGCAAGCATTACCTCTGGCCTCTGTTTCATTACATGGTACCCATGTCCACGAGCCAAGGTGCTCGTTTCGATCGCTCGCAGTGGCAAGCTTATGTTTTGGCCAACAGAATCTTCGCGAACAAGGTAACAGAGGTGATCAACCCAGACGAGGATTACGTTTGGGTCCATGATTATCATCTCATGATCTTGCCTACGCTACTGAGGAAACGATTCCACCGGGTCAAGCTGGGATTCTTTATGCATAACACATTCCCGTCTTCAGAAATCTATAGAACTATACCCGTTCGTGATGATCTCCTTCGGGCCTTGTTGAATTGTGATTTAATCGGATTCCACACCTTTGATTACGCCAGACATTTCTTGTCCTGTTGTAGCAGGATTTTCGGTCTGGATTATGAGTCTAAGAGGGGTTACATAGGACTGGATTATTACGGTCGAACAGTGATGATTAAGATCCTGCCGGCCGGAATTCACATGGGTCAGCTTGAATCGGTGTTTTCCTTGTCGGAGACGGCTGAGAAGATCAAGGAATTGAAGAAACGATTTGAGGGGAAATTTGTAATTTTGGGTATGGATGACATGGATTTGTTCAAAGGTATCAACTTGAAGTTCTTAGCAATGGGGAAGCTCTTGGATATGCATGAGGACTTAAGGGGTCGAGTTGTTCTAGTTCAGATTCTGAACCCTGCTAGGAGCGAAGGTAAAGACATTCAAGATGTCCAAAACGAGACCAATGCGATCGCGAAGGACGTCAATGAGAAATACGGCGAAACAGGGTACCAGCCAATTATCGTCATCAACGGCCCTGTTTCAACACTTGAGAAAGCTGCTTACTGTGCCATTTCTGAATGCTGTATTGTGAATGCTGTGAGAGATGGGATGAACTTGGTGCCTTATATGTACACTGTTTGCAGACAGGGCAGCCCTGTGCTGGACAGAGCACTTGATGAAGATGATAATGATTCTGAAACGCCTAAGCAGAGTGTCATCGTAGTCTCTGAATTCATTGGATGCTCGCCATCTCTGAGTGGTGCCATCCGAGTGAACCCATGGAACATCGATGAGGTGTCGGAGGCCATGAATTTGGCGATCACAATGCCAGAGGCGGAGAAGCATTTGCGTCATGAAAAGCATTACAAGTATATCAGCTCTCACGATGTAACTTATTGGGCTCGAAGTTTTGATCAGGACTTGGAGAGAGCATGCAGGCAGCATTATCTCAAGAGATATTGGGGCGTTGGTCTAGGCTTGGGGTTCAGAATTGTGGCTTTGGATCCTACGTTCAGGAAGCTTTCAGTGGATAACATTGCGTCTGCTTATAGAAACACCCACAATCGTTTGATCCTTCTGGACTATGATGGTACTATGTTGCCACAGCCATCTATCGACAAAACTCCGACCAACGAGGTTATTTCCATCTTGAATTGTCTATGTAGTGATCCCAAGAATATGGTGTTCATTGTGAGTGGAAGAGATAAGAAGTGCCTAAGCAAATGGTTTTCTCCATGTGAGAAGCTTGGTCTTTCTGCTGAGCATGGTTACTTCACAAGGTGGAGTAGTGATTCTTCTTGGGAGACATGTGGATTGACAATGGACTTTGATTGGAAAAGGATTGCAGAACCGGTAATGGCGCTTTACACAGAAGCAACTGATGGCTCTTTCATTGAACAAAAAGAAAGCGCACTGGTTTGGCATCATCAAGAAGCTGACCCTCACTTTGGATCATCCCAAGCCAAAGAGCTTCTTGATCACCTTGAGAGTGTTCTTGCCAATGAACCAGTCATTGTTAAAAGAGGACAACACATTGTGGAAGTAAACCCTCAGGGTGTGAGCAAAGGCATAGCAGTGGAAAGCCTCATATCAAGCATGAGGAGTGAGGGAAAGTCTCTGGATTTTCTGTTGTGTATAGGAGATGATCGTTCAGATGAAGACATGTTTGAGAGCATTGCTTCCACAGTCTCTAATCCAAACCTGCCAACCATAGAACATGTATTTGCATGCACAGTTGGTCAGAAACCAAGCATGGCTGAATATTATTTGGATGATACCTGCGAAGTCATCAAGTTGCTCAAAGGACTTGCTAATGCTACTTCTGCATCACCACCCTCAAGGCCTCTATATTCTCTGGAGGATTCACAAGGGTCTCCATAG 2604 0.4627 MLSRSCLDLLSLVSVDDYRALCQIPRVSTVPGVVSKFDAAEDDHADAGSGSDEVVSSGSPERRIIVANQLPIRAYRDVNTKKWSFEFDSDSLVLQLKDGLPSDVDVLYVGSLKVEIDPSEQDEVAQVLLEKFQCVPTFLPSEIHNKYYHGFCKHYLWPLFHYMVPMSTSQGARFDRSQWQAYVLANRIFANKVTEVINPDEDYVWVHDYHLMILPTLLRKRFHRVKLGFFMHNTFPSSEIYRTIPVRDDLLRALLNCDLIGFHTFDYARHFLSCCSRIFGLDYESKRGYIGLDYYGRTVMIKILPAGIHMGQLESVFSLSETAEKIKELKKRFEGKFVILGMDDMDLFKGINLKFLAMGKLLDMHEDLRGRVVLVQILNPARSEGKDIQDVQNETNAIAKDVNEKYGETGYQPIIVINGPVSTLEKAAYCAISECCIVNAVRDGMNLVPYMYTVCRQGSPVLDRALDEDDNDSETPKQSVIVVSEFIGCSPSLSGAIRVNPWNIDEVSEAMNLAITMPEAEKHLRHEKHYKYISSHDVTYWARSFDQDLERACRQHYLKRYWGVGLGLGFRIVALDPTFRKLSVDNIASAYRNTHNRLILLDYDGTMLPQPSIDKTPTNEVISILNCLCSDPKNMVFIVSGRDKKCLSKWFSPCEKLGLSAEHGYFTRWSSDSSWETCGLTMDFDWKRIAEPVMALYTEATDGSFIEQKESALVWHHQEADPHFGSSQAKELLDHLESVLANEPVIVKRGQHIVEVNPQGVSKGIAVESLISSMRSEGKSLDFLLCIGDDRSDEDMFESIASTVSNPNLPTIEHVFACTVGQKPSMAEYYLDDTCEVIKLLKGLANATSASPPSRPLYSLEDSQGSP 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5375g00010 867 SUPERFAMILY HAD-like 597 845 IPR036412 -
Pral5375g00010 867 Pfam Trehalose-phosphatase 600 833 IPR003337 GO:0003824|GO:0005992
Pral5375g00010 867 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 314 - -
Pral5375g00010 867 Pfam Glycosyltransferase family 20 62 550 IPR001830 GO:0003824|GO:0005992
Pral5375g00010 867 NCBIfam trehalose-phosphatase 596 844 IPR003337 GO:0003824|GO:0005992
Pral5375g00010 867 CDD GT20_TPS 62 550 IPR001830 GO:0003824|GO:0005992
Pral5375g00010 867 Gene3D Glycogen Phosphorylase B; 56 315 - -
Pral5375g00010 867 MobiDBLite consensus disorder prediction 847 867 - -
Pral5375g00010 867 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 726 856 - -
Pral5375g00010 867 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 596 713 - -
Pral5375g00010 867 FunFam Alpha,alpha-trehalose-phosphate synthase 316 534 - -
Pral5375g00010 867 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 554 - -
Pral5375g00010 867 CDD HAD_TPP 598 839 - -
Pral5375g00010 867 NCBIfam HAD-IIB family hydrolase 598 800 IPR006379 -
Pral5375g00010 867 Gene3D Glycogen Phosphorylase B; 316 534 - -
Pral5375g00010 867 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 26 846 IPR001830 GO:0003824|GO:0005992
Pral5375g00010 867 Gene3D - 596 715 IPR023214 -
Pral5375g00010 867 Gene3D - 725 853 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5375g00010 Pral-Chr5375 156084 159172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5375g00010 1 851 Trehalose Biosynthesis Gene Families AT2G18700 65.497 0.0 1185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5375g00010 K16055 - qsa:O6P43_002917 1397.1