Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5375g00005 ATGGGATCCAACCTGAGTTGCTGTGGTTCAGACAAGGTGGAAGAAGTGCCAGGATCAGGTAGTGTGGCGAATAATAATTCATGGAGAATATTCACATACAAGGAGTTACATGCGGCCACCAATGGTTTCAGTGAGGATTGTAAACTTGGTGAAGGTGGCTTTGGAAGTGTCTACTGGGGAAAAACCACTGATGGTCTCCAGATAGCAGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTCGCAGTAGAAGTAGAAGTTCTTGGAAGGGTAAGGCACAATAATTTGCTAGGCCTAAGAGGTTACTGCGCCGGCGACGAACAACGACTCATAGTCTATGATTACATGCCAAATCTCAGCCTTCTCTCTCACCTCCATGGCCAGTTCGCCGCAGAAGTCCAACTCGACTGGAAAAGAAGGATGAACATTGCCATCGGCTCAGCCCAGGGCCTACTGTACTTGCATCACGAGGTTACGCCTCATATAATCCACAGAGATATAAAAGCAAGCAATGTTCTGTTAAACTCAGACTTTGAGCCTCTGGTTGCAGATTTTGGGTTTGCGAAGCTAATCCCAGAAGGGGTAAGCCACCTGACGACCCGTGTGAAGGGCACTTTAGGTTACTTGGCTCCTGAGTATGCCATGTGGGGTAAGGTTTCTGAAAGTTGCGATGTTTATAGCTTTGGGATTCTTCTGTTAGAGCTGGTCACAGGAAGGAAGCCCATTGAGAAACTACCAGGAGGGCTAAAGAGAACCATAACTGAGTGGGCTGAACCTTTCATAACCAAAGGCAAGTTCAGAGAAATGGTGGATCGAAAACTTAGAGGTAACTTCGATGAGAGACAAGTTGAGCAGATGATCAATGTGGCTGCTCTGTGTGTTCAGAGTGAGCCTGAGAAGCGACCAAACATGAAACAAGTGGTTAATCTGTTGAAAGGGTATGAAGCAGATCACGGGAAAGTGATGAAGACGAGGATAGATAGTGTCAAGTATAATGAACAGCTTATGGAGCTTGATCAGAATAGTGATGATGATGAAGATGAAACCAACGGTGGATATGGTGTTTTTAGTGCTCTTGAGATTCAAAAGATGCATGATCCTTACAAGCGCCATGGGGATGCAAAAATGGAGAAACCAATTTGA 1152 0.4523 MGSNLSCCGSDKVEEVPGSGSVANNNSWRIFTYKELHAATNGFSEDCKLGEGGFGSVYWGKTTDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHNNLLGLRGYCAGDEQRLIVYDYMPNLSLLSHLHGQFAAEVQLDWKRRMNIAIGSAQGLLYLHHEVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPFITKGKFREMVDRKLRGNFDERQVEQMINVAALCVQSEPEKRPNMKQVVNLLKGYEADHGKVMKTRIDSVKYNEQLMELDQNSDDDEDETNGGYGVFSALEIQKMHDPYKRHGDAKMEKPI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5375g00005 383 Gene3D Phosphorylase Kinase; domain 1 18 118 - -
Pral5375g00005 383 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 118 - -
Pral5375g00005 383 Pfam Protein tyrosine and serine/threonine kinase 47 314 IPR001245 GO:0004672|GO:0006468
Pral5375g00005 383 CDD STKc_IRAK 49 316 - -
Pral5375g00005 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
Pral5375g00005 383 SUPERFAMILY Protein kinase-like (PK-like) 22 314 IPR011009 -
Pral5375g00005 383 PANTHER OS01G0253100 PROTEIN 24 319 - -
Pral5375g00005 383 ProSiteProfiles Protein kinase domain profile. 43 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5375g00005 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pral5375g00005 383 SMART serkin_6 43 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5375g00005 383 Gene3D Transferase(Phosphotransferase) domain 1 119 341 - -
Pral5375g00005 383 FunFam PTI1-like tyrosine-protein kinase At3g15890 119 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5375g00005 Pral-Chr5375 80420 81867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5375g00005 2 355 Trihelix Transcription Factor Family AT1G70460 44.658 9.12e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pral5375g00005 PK_Tyr_Ser-Thr 3.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5375g00005 - - gsj:114393039 648.662