Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5375g00004 ATGATGCTTTCTTCTTCACCCAGTAAAATACTAATTGGTCTGCCCTTAGACACAAATGATAGCAGAGAACTTCTCTCATGGGCAATTAGAGTGCTAGCCAATCCAAACGACACCATTGTGGCCTTTCATGTTCTTGTTTCTAAGGATAAGAAGAAGAAAAGGAAGAAGCGTGCTTCAATGACAAGAAGGCAGTCACAACTTCGACAGGCTAAAGCCTCTGTCATATCTGTGCTTGGTGAATTTGCCAAGACGTGTTGGTCTAAGCAGGTGAATCTGGAAGCCAAAGTGGCATTTAGTTCCAGTGTGGGTGGAGGTTTAGTTGAAGAAGCCAAGTCAATATCTGCTGACTTTCTTCTTCTTCGTGGTTCTAGAAACCCGTCTAACAAGAATCACGCCTCTAATGGAATCACCAAGTACTGCTTTGAGAATGTTCACGAAAGCTGCACCTTAGTCTCCGTTGGGAAAAGCTCCAAATCCAGTTTTACAAATTCTCAAGGCTCAGGGTGGCTTGTGAAGGATAAGGAAAGTGACAGGGGAGCATCCCCTGTTTTGAAGGCTTTTATCACAGGCTCAAACTCTAAGACACAAACACGTTCACCAAGAACAGTATTGGACGCACTTGAGGGTCAATCTAACAGCACAGAAGATGACACTTTTAGCACAAGAGTCTCAAGCATTACAGACACTCCCTCAACAGGTTCTAAAATCAAAAGCCAATCCAATTTAAGGAAACCACAGTCGCCATTCAGATTCATAGCCTCACTCCTTGCCTCACCATTAAGAAGGAAGAACTCCAAGAAGTCCCAAAATGAAAAGAAACAACCCTTGTTAAAGTGCTTCAGTTATGAGGAGATCTCCAATGCCACAAATGGCTTCCACCAAGACAATTTGGTGGGACGAGGTGGGTACTCTGAAGTATACAGAGGAGATCTTTCTGATGGACAAACTATTGCAGTGAAAAGGTTGTCCAAGGACAACAAGGACCCTAACAAGGAAAAGGAGTTCCTCATGGAATTAGGAGTCATCGGACATGTCTGCCATCCTAATACTGCATCTTTAGTTGGGTGCTGCATTGAAAATGGACTCTACCTGGTTTTCAAATACTCCCAAAATGGAAACTTGGCCACTGCATTGCATGGTAAATCAGGAACGTCACTTGACTGGTCAGTGAGATACAAAATCGCCATTGGAATAGCAAGGGGTCTGCATTATCTTCACAAGTGTTGCAAACGCAGAATAATTCATCGTGACATTAAAGCCTCCAATGTGCTTCTGGGTCCAGATTATGAACCACAGATTACTGATTTTGGGCTAGCAAAGTGGCTTCCAAACAAGTGGACTCACCATGCCGTAATACCAGTGGAAGGCACGTTTGGGTACTTGGCACCAGAGTCCTTCATGCATGGAATAGTGGATGAGAAAACTGATGTTTATGCCTTTGGGATTCTTCTCCTGGAGATTATAACTGGAAGAAGACCTGTTGATTCTAAGAAACAGAACCTTCTCCTTTGGGCAAAGCCTCTGATGGAATCAGGGAACATTAAGGACCTAGCTGATCCAAGAATGGAAGGTGTATACGATGAAGAGGAATTGAATAGAATAGTTATCACAGCTTCATACTGTGTGAGACAATCTCCCCTTTGGCGTCCCCAAATGAGCGAGGTGTTGGAGCTGCTAATTAGTGGGGAAGACAGTGAGGCTGGGAACAGCAGGAGGATCCCAAAGTTCACGTCTGATGAACTGGATGATTATTCCATGGCTTTTGGATATGAAGTGCCTTCTGACATATCTCTGCAGGATTTTTTGTGA 1809 0.4378 MMLSSSPSKILIGLPLDTNDSRELLSWAIRVLANPNDTIVAFHVLVSKDKKKKRKKRASMTRRQSQLRQAKASVISVLGEFAKTCWSKQVNLEAKVAFSSSVGGGLVEEAKSISADFLLLRGSRNPSNKNHASNGITKYCFENVHESCTLVSVGKSSKSSFTNSQGSGWLVKDKESDRGASPVLKAFITGSNSKTQTRSPRTVLDALEGQSNSTEDDTFSTRVSSITDTPSTGSKIKSQSNLRKPQSPFRFIASLLASPLRRKNSKKSQNEKKQPLLKCFSYEEISNATNGFHQDNLVGRGGYSEVYRGDLSDGQTIAVKRLSKDNKDPNKEKEFLMELGVIGHVCHPNTASLVGCCIENGLYLVFKYSQNGNLATALHGKSGTSLDWSVRYKIAIGIARGLHYLHKCCKRRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPESFMHGIVDEKTDVYAFGILLLEIITGRRPVDSKKQNLLLWAKPLMESGNIKDLADPRMEGVYDEEELNRIVITASYCVRQSPLWRPQMSEVLELLISGEDSEAGNSRRIPKFTSDELDDYSMAFGYEVPSDISLQDFL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5375g00004 602 PANTHER OS08G0249100 PROTEIN 52 571 IPR046958 -
Pral5375g00004 602 FunFam Putative receptor-like serine/threonine-protein kinase 259 368 - -
Pral5375g00004 602 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Pral5375g00004 602 Pfam Universal stress protein family 15 151 IPR006016 -
Pral5375g00004 602 MobiDBLite consensus disorder prediction 187 244 - -
Pral5375g00004 602 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 145 - -
Pral5375g00004 602 Gene3D Phosphorylase Kinase; domain 1 252 368 - -
Pral5375g00004 602 SUPERFAMILY Protein kinase-like (PK-like) 269 559 IPR011009 -
Pral5375g00004 602 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 369 573 - -
Pral5375g00004 602 Gene3D HUPs 3 151 IPR014729 -
Pral5375g00004 602 CDD USP_Like 9 124 - -
Pral5375g00004 602 Pfam Protein tyrosine and serine/threonine kinase 294 558 IPR001245 GO:0004672|GO:0006468
Pral5375g00004 602 SMART serkin_6 292 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5375g00004 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Pral5375g00004 602 Gene3D Transferase(Phosphotransferase) domain 1 370 577 - -
Pral5375g00004 602 ProSiteProfiles Protein kinase domain profile. 292 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5375g00004 Pral-Chr5375 73769 76730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5375g00004 280 598 Trihelix Transcription Factor Family AT1G70460 40.356 4.44e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral5375g00004 PK_Tyr_Ser-Thr 8.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5375g00004 - - pcin:129309776 1048.11