Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5372g00014 ATGGAAACGGAAGCGGAAACAGGAATTGCATGTGATGATGAATTCATTTTCCGTTCTAAACTGCCTGATATTTGCATCCCGACCCACCTCCCACTTCATTCTTATTGTTTCCAGAATTTTTTGCAATTCAAACACCGTCCCTGTTTGATCAACACCAAAACCAACCAGACATTCACCTACGCCGATGTCCAGCTTATTGCCGCAAAAGTCGCCTCCGCTCTCAACGACCTTGGGGTCCGACAAGGCCACGTCATCATGCTTCTCCTTCAGAACTGTCCCGAATTCGTCTTCTCCTTCCTCGGAGCTTCCTCCCTCGGAGTCATCGTCACGACGGCCAACCCATTTTACACCGTAGCGGAGGTCGAAAAGCAAGCCACCGCTTCAAACACCACGCTGATCATCACGCACGAGTCCTTGCTCGAGAAGGTTAAGGATTTCGCGAGAGACAACAACGTCAAACTGGTGCTTATCGACGATGACGAGGCAACCCTGCCGCAGGAGGATATTATGTCTAATTTCGTACGGTTCTCCGATTTGATGAAGGCCGAGAAGAATAATATCCCTCCGGTGACGATATCTACGGAAGACGTCGTCGCGATGCCTTATTCATCAGGCACCACAGGGCTTCCCAAGGGAGTGATGCTAACCCACAAAGGCCTGGTCACAAATGTGGCTCAACTGGTTGACGGAGAAAACCCTAATTTGTATTTGGAGAAGGAGGATGTGATTGCTTGCGTTTGTCCTCTGTTCCACAGTTATTCGTTGTTTACCATTCTACTATGTGGGCTTCGAGTCGGTGCTGCTATTTTGATCATACCCAAGTTTGAAATAGCGACGATGTTAGAGTTGGTTCAGAAACACAACGTAACGGTTGCGCCGTTCGTGCCGCCCATTCTGCTGGCCATAGTTAATTACCCAAACCTGCAACAATACGACGTCTCGTCGATAAGGATGATCATGTGCGGGGCAGCCCCCTTGCGGAAAGAGCTTGAAGATGCAGTGAAGGCTAAGCTTCCTAACGCTAGTCTTGCACAGGCTTATGGGATGACGGAGGCTGGTCCAGCGGTGGCCATGAGCCTAGCGTTTGCTAAAGAGGCTTGCGAGGTGAAATCAGGTGCGTGCGGGAGCATAGTAAGAAACGCTGAGATGAAGATCGTTGATCCTGAGACTGGCATATCCCTTGCCCGGAATCAAGCGGGCGAGATTTGTGTTCGAGGCAATCAGATTATGAAAGGTTATGTAAACGATTCAGAAGCAACAAAGAGAACAATAGATGAAAGAGGATGGCTGCACACAGGTGATATTGGATATGTGGACGATGATGAAGAGCTGTTCATAGTGGATCGTTTAAAGGAAGTCATCAAATACAAGGGCTTTCAAGTTGCTCCTGCTGAGCTTGAAGCTCTTCTTCTTTCTCATCCTTCCATTTCTGATGCTGCTGTTCTCCCGATGAAAGATGAAGTTGCAGGAGAGGCTCCTGTTGCGTTTGTTGTGAAATCAGAAGGTTTCAACATCTCTGAAGATCAAATCATGGAGTACATCTCTGAGAAGGTGGTGTATTACAAGAGAATCAAGAGGGTCTTCTTCGTGGGCTCTATTCCAAGGTCACCCTCCGGCAAGATTCTGCGCAAAGACCTAAGAGCAAGGCTCCCCAACGAGTGA 1662 0.4844 METEAETGIACDDEFIFRSKLPDICIPTHLPLHSYCFQNFLQFKHRPCLINTKTNQTFTYADVQLIAAKVASALNDLGVRQGHVIMLLLQNCPEFVFSFLGASSLGVIVTTANPFYTVAEVEKQATASNTTLIITHESLLEKVKDFARDNNVKLVLIDDDEATLPQEDIMSNFVRFSDLMKAEKNNIPPVTISTEDVVAMPYSSGTTGLPKGVMLTHKGLVTNVAQLVDGENPNLYLEKEDVIACVCPLFHSYSLFTILLCGLRVGAAILIIPKFEIATMLELVQKHNVTVAPFVPPILLAIVNYPNLQQYDVSSIRMIMCGAAPLRKELEDAVKAKLPNASLAQAYGMTEAGPAVAMSLAFAKEACEVKSGACGSIVRNAEMKIVDPETGISLARNQAGEICVRGNQIMKGYVNDSEATKRTIDERGWLHTGDIGYVDDDEELFIVDRLKEVIKYKGFQVAPAELEALLLSHPSISDAAVLPMKDEVAGEAPVAFVVKSEGFNISEDQIMEYISEKVVYYKRIKRVFFVGSIPRSPSGKILRKDLRARLPNE 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5372g00014 553 Gene3D - 451 552 IPR045851 -
Pral5372g00014 553 SUPERFAMILY Acetyl-CoA synthetase-like 17 552 - -
Pral5372g00014 553 FunFam Long-chain-fatty-acid--CoA ligase FadD 18 451 - -
Pral5372g00014 553 Pfam AMP-binding enzyme 42 456 IPR000873 -
Pral5372g00014 553 CDD 4CL 26 546 - -
Pral5372g00014 553 FunFam 4-coumarate--CoA ligase 2 452 553 - -
Pral5372g00014 553 ProSitePatterns Putative AMP-binding domain signature. 200 211 IPR020845 -
Pral5372g00014 553 Gene3D - 9 450 IPR042099 -
Pral5372g00014 553 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 548 - -
Pral5372g00014 553 Pfam AMP-binding enzyme C-terminal domain 465 540 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5372g00014 Pral-Chr5372 114335 116869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5372g00014 12 518 Monolignol Biosynthesis Gene Families AT1G51680 62.549 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5372g00014 K01904 - qsa:O6P43_022302 773.467