Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5372g00008 ATGGCCATTTTCTGTTCTTGTCTGACTGCCACCTATCAATTGCAGCGAAGGTCATCTGGTAAAGTCATGGATACAAATGAGGAGTTGTCAATAGTTCTCGAACTATCTGAAGATGACTTTTTCTTTGATAGAAAGGAGAAAGTACTTCGAAGCAAAGGTTTTAGTTCCAAGGAACGAGTGTGTCTCCAGGGCTCTTCAAAGCCAGATCGGATGAGTGATGCTGTGAAAGTACTGGTTCAGATTGCAAGAATTATACATTTGAATGAGGTGGAACTTTATTTTGCTGATGATGCAAGTACATCTGGGGAATTTTACAGCCCTAGGAATGAATTAGAGGCTCTCAATTCCATCATTTCACTCATTGACACATTACTTTCTAGTTATAAGCATCCTCACACGATTATACTGCAAGAATTGCGGACAGCAATTCTCGCATTAATTTCTGATTTTGGGGACAAGAACAGTTTGGGAGCAACAGTTGAAAAAGAGCTTAGATGTGAACAAGAAGAGCACCTATTAGAATGGGGAAAAAACAATGGCGTAAGGACACAGTTACAGATAGCATGTTCTTTCATTTTGCCTGCATTTTATACCAGATATCAAAGGAGCAGGCGAGGTGCCGTAGCAGAAAAAGATCTTAAAGTTGGAGATATTGCTCTAGAAATTCCAGTATCCATTATTATTAATGAGGATCTTGTGCGTGAAACTGATATGTACTGTGTCCTGAACGAAAAAGGTATATCTTCTGAGACAATGTTGCTATTATGGAGCATGAAGGAGAAGCAAAATCAGGATTCAAGATTCAGAATTTACTTTGACTCGCTCCCAGAAAAATTTAATACGGGGCTGAGCTTTGGTATTGATGGAATCACAACATCTGAAGGAACCTTGCTCTTGGAAGAGATAATGGAAGCAAGGCAGTACCTTCATACTCAGTATGATGAATTATTCCCTGCTTTGTGCAATGCTTTTCCTGATATATTTCCACCAAAGCTGTACACTTGGGAGCAATTTCTATGGGCCTGCGAACTCTGGTATTCAAATAGTATGAAGATAATGTTTTCTGATGGAACTTTAAGGACGTGCTTAATTCCTATTGCTGGATTTCTTAATCATTCGCTGTGCCCACACATCCTGCACTATGGTAAAGTAGATCCTGCAACAAATTCATTGAAATTTCCTCTTTCAAGACCATGCAGATCTGGAGAAGAGTGCTGTTTAAGCTATGGGAACTTCTCTAATTCTCATTTCCTTACCTTTTATGGTTTCTTGCCACAGGGAGATAACCCATACAACGTCATCCCACTTGACATTGATGCTTCTGGCATTGATTCTATGGAGGATGAACCCATGTCCAGCTGGACCAATCACATGGTTCGGGGTACTTGGCTGTCCAACAACCACAATTTGTACTACTATGGCCTCCCTTCCCCATTGTTGGACCATTTTCGAAGATCTCGAAATCCCATGCTGCATACTAAGACCTTTTTGCAAGAGGACTTGGAAAATGAGCTGGAAATTCTAGAAGATCTCAGATCTATCTTCGATAGCATGATGGACAGTTTGGATGACACGAGTCTTGATGACAGAGAAAACTGCTCTTGGGATGAAAACTTAGCACTGGAGTATAAGATTCAACAAAAACGAATCGTCTCCTCTATCTCAACTTCATGTAATACTGGTATGGATATGGTCAAGAATGAACTGTGCAAGTGCATGGCTGAGGACATCCGAGGGTAA 1740 0.4052 MAIFCSCLTATYQLQRRSSGKVMDTNEELSIVLELSEDDFFFDRKEKVLRSKGFSSKERVCLQGSSKPDRMSDAVKVLVQIARIIHLNEVELYFADDASTSGEFYSPRNELEALNSIISLIDTLLSSYKHPHTIILQELRTAILALISDFGDKNSLGATVEKELRCEQEEHLLEWGKNNGVRTQLQIACSFILPAFYTRYQRSRRGAVAEKDLKVGDIALEIPVSIIINEDLVRETDMYCVLNEKGISSETMLLLWSMKEKQNQDSRFRIYFDSLPEKFNTGLSFGIDGITTSEGTLLLEEIMEARQYLHTQYDELFPALCNAFPDIFPPKLYTWEQFLWACELWYSNSMKIMFSDGTLRTCLIPIAGFLNHSLCPHILHYGKVDPATNSLKFPLSRPCRSGEECCLSYGNFSNSHFLTFYGFLPQGDNPYNVIPLDIDASGIDSMEDEPMSSWTNHMVRGTWLSNNHNLYYYGLPSPLLDHFRRSRNPMLHTKTFLQEDLENELEILEDLRSIFDSMMDSLDDTSLDDRENCSWDENLALEYKIQQKRIVSSISTSCNTGMDMVKNELCKCMAEDIRG 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5372g00008 579 Pfam SET domain 205 410 IPR001214 GO:0005515
Pral5372g00008 579 CDD SET_LSMT 205 424 - -
Pral5372g00008 579 FunFam Transcription factor, E2F and DP-related 167 424 - -
Pral5372g00008 579 SUPERFAMILY SET domain 169 431 IPR046341 -
Pral5372g00008 579 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 167 528 - -
Pral5372g00008 579 Pfam Rubisco LSMT substrate-binding 37 130 IPR015353 -
Pral5372g00008 579 Gene3D set domain protein methyltransferase, domain 1 166 424 - -
Pral5372g00008 579 Gene3D - 24 143 IPR036464 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral5372g00008 SET 1.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5372g00008 K19199 - gmx:100778605 795.423