Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5370g00001 ATGCCGAAGTCCAAACGCAATAAAACAGTCACACTCTCGAAGACTAAGAAAAAGGGGAGGGAGCATAAAGAAGCAATAGTAAATGCCATAAAAGAGGCTGCTGAAAAATACAGCTCAGTGTATGTGTTCTCTTTTGAAAACATGAGAAATAAGAAATTCAAGGAGTTCAGGGAGCAACTGAAATCTAACAGCAGGTTTTTCTTGGGGTCAAACAAAGTCATGCAGGTCGCTTTAGGTCATTCTGCTGCTGATGAGATTAGACCTGGTCTTCACAAGGTTTCTAAGCTTCTGCGAGGAGATGCTGGAATGTGTTTTACAAATTTGCCAAAAGAAGAAGTTGAAAGGTTATTTAGTGAGTTTGAGGAGTATGACTTTGCGAGAACAGGAAGCACTGCGACTGAGAAGGTGGAACTCAAAGAAGGTCCTTTGGAGCAGTTCACCCATGAGATGGAGCCATTTCTACGGAAGCAAGGCATGCCTGTCCGGTTAAATAAAGGAGTGGTGGAACTTGTCTCAGATTTTGTTGTCTGTGAGGAGGGGAAGCCATTGTCACCTGAGGCATCTCGCATACTGCGTTTACTGGGAATACAGATGGCTACATTTAAACTCCATCTGATATGCAGATGTAGTCCTGACGATTTTGAGCTGTACATACAAGGACCAGATGATTCAGACGTGGAAACGAATTAG 690 0.4304 MPKSKRNKTVTLSKTKKKGREHKEAIVNAIKEAAEKYSSVYVFSFENMRNKKFKEFREQLKSNSRFFLGSNKVMQVALGHSAADEIRPGLHKVSKLLRGDAGMCFTNLPKEEVERLFSEFEEYDFARTGSTATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEASRILRLLGIQMATFKLHLICRCSPDDFELYIQGPDDSDVETN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5370g00001 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 220 - -
Pral5370g00001 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Pral5370g00001 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Pral5370g00001 229 FunFam Ribosome assembly factor mrt4 29 128 - -
Pral5370g00001 229 Gene3D - 30 209 IPR043141 -
Pral5370g00001 229 FunFam Ribosome assembly factor mrt4 125 198 - -
Pral5370g00001 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Pral5370g00001 229 Gene3D - 125 198 IPR043164 -
Pral5370g00001 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5370g00001 Pral-Chr5370 3835 7039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5370g00001 35 217 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 20.856 1.42e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5370g00001 K14815 - gmx:100305462 398.667