Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5369g00004 ATGAGAAGAGAGAAAGAAGAAGAAGAAGAAGTTGCAGAAGAGATGGGAATTGATCTGTCCTTGACGATTAATGCTAATAAACAAGAAGAGGAAAGAGAGAGAATATTATCATTTGATGAGGAGAAGGGAAAGAAGGAATTAGAAGAAGCAGCTGATGAACAGATCACAGAAGGTGAAATAGAAGACGATGATGCATCAGTTGAAGAAATTTCTCTTCATCAAAACTTAGCTTCCACGGAGGAGCTAAGAGTGTTAAAAATGGAGATGGATCGTATGAAAGAGGAAAACAAAGTGTTGAGGAGAGTAGTGGAGCAAACCACGAAAGACTATTATGATCTCCAAATCAAATTCTCAGCCATCCATAATCATCCTCTCAACAATATGAACAACAAGGATCCTCAAATCTCTCTCACACTCCAAGGCAATAATGATAATAATATTGCAAACACCAGCACAAGTAGTGAAGAAGAAGGACCACCACCACCACCGACAAACACTAACATTATTAAGGATGATTTGGGATTATCACTAAGGTTAAACACAATAAGTAGTACAAGTTCAGAAGATGAAGATTATGGAGGACGCAACATTAATAATCACAAACAAGATCATGTGGCTTCTCCCAATTATCAGTTGAATCGGCTTCATCATCATCATCACTTGCCTGTTTCTGCTTCTGCTACTGTTGCTGCTTCTCCTTCAAATAGAAAGGCTAGGGTTTGTGTTCGAGCAAGATGTGACTCAGCCACTATGAATGATGGTTGCCAGTGGAGAAAATATGGGCAGAAAATTGCCAAAGGAAATCCATGTCCTCGTGCCTATTATCGATGCACCGTAGCTCCAGGATGCCCTGTAAGGAAACAGGTACAAAGATGTATAGAGGACATGTCAATCTTAATTACAACCTACGAAGGAACACATAATCATCCTTTACCTGTAGGTGCCACAGCCATGGCTTCTACTGCTTCCACAGGAGCTAATTCCTTCATGTTCCTTGACTCTTCACAACCCTCCATTGCTTCTTCTTCTCCCTCTTCCTCTACTTTCATCCCTTACAATATCACAGCCCTAAACCCTAATAATAATCAGAATCATCATCCTTCTAAAGCTGGCCATGTCTTTGATCTCACAAACAACCACCCTAATTATAAAACCAGTCATTTCTCTGCGACTCATCAACCATCAGGTTTTTCTTGGATGCCAAACAGATCAATACTGAACTCTTTTCTCTGCCCTAGAGATCGTGGGAAAGAAGACGATGATGATGATAAGAAGAGGAAGAATGTTTCAGCTGATGCTAGGTTTAGGGTTTCTGTTGCTGCTGCAGCCGTTAACAACAATAAAGAGAGCCATCCTACTACCTTAGGATCTTCGTCCTCTTTTGGCCCTAGGAATGTTTAA 1401 0.4054 MRREKEEEEEVAEEMGIDLSLTINANKQEEERERILSFDEEKGKKELEEAADEQITEGEIEDDDASVEEISLHQNLASTEELRVLKMEMDRMKEENKVLRRVVEQTTKDYYDLQIKFSAIHNHPLNNMNNKDPQISLTLQGNNDNNIANTSTSSEEEGPPPPPTNTNIIKDDLGLSLRLNTISSTSSEDEDYGGRNINNHKQDHVASPNYQLNRLHHHHHLPVSASATVAASPSNRKARVCVRARCDSATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIEDMSILITTYEGTHNHPLPVGATAMASTASTGANSFMFLDSSQPSIASSSPSSSTFIPYNITALNPNNNQNHHPSKAGHVFDLTNNHPNYKTSHFSATHQPSGFSWMPNRSILNSFLCPRDRGKEDDDDDKKRKNVSADARFRVSVAAAAVNNNKESHPTTLGSSSSFGPRNV 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5369g00004 466 MobiDBLite consensus disorder prediction 123 172 - -
Pral5369g00004 466 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 49 445 IPR044810 GO:0003700
Pral5369g00004 466 Pfam WRKY DNA -binding domain 252 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5369g00004 466 Coils Coil 75 109 - -
Pral5369g00004 466 MobiDBLite consensus disorder prediction 443 466 - -
Pral5369g00004 466 MobiDBLite consensus disorder prediction 123 155 - -
Pral5369g00004 466 Gene3D WRKY domain 236 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5369g00004 466 MobiDBLite consensus disorder prediction 410 466 - -
Pral5369g00004 466 FunFam probable WRKY transcription factor 31 236 313 - -
Pral5369g00004 466 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5369g00004 466 MobiDBLite consensus disorder prediction 1 25 - -
Pral5369g00004 466 SUPERFAMILY WRKY DNA-binding domain 244 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5369g00004 466 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5369g00004 466 MobiDBLite consensus disorder prediction 412 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5369g00004 Pral-Chr5369 45367 48685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5369g00004 2 373 WRKY Transcription Factor Family AT1G68150 41.860 2.84e-77 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5369g00004 WRKY 1.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5369g00004 - - lang:109350732 341.658