Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5366g00001 ATGGAGGGGGATCAGGAAACAAGTGTGGCTGCATCTTCAGTGGCTCCCAAGAAGAAGAAGAATGGGTCCTTTCGATCCATTTTCATGCACGCCGATATGTTAGATTGGTTCCTCATGGTCCTTGGCCTTGTTGGGTCCCTCGGCGACGGTTTCACCACTCCTCTCGTCCTTCTCATCAGTAGCCGCTTGATGAACAATATAGGCTCTGGTCCTACCATCGATCCGAATGCTTTTACAAATTCCATTAATAAGAATGCGGTGGCCCTGCTATATTTGGCTGCTGGCTCATTCCTCACTTGCTTCCTCGAGGGGTATTGCTGGACCAGAACAGGGGAAAGGCAAGCTGCCAGAATGAGAGCTAGGTATTTGAAAGCGGTGCTCAGACAGGATGTTGCTTACTTTGATCTGCACGTGACGAGCACGTCGGAGGTGATCACCAGCGTCTCCAACGACAGCCTTGTAATTCAAGATGCTATTGCTGAGAAGGTGCCAAACTTCTTGATGAACGTGTTTATGTTCATCGGGAGCTACGTAGCGGCTTTCGCGATGTTATGGAGGCTGGCTATTGTGGGGTTCCCATTCGTGGTGCTGCTCGTGATCCCTGGTTTACTCTACGGAAGGACTCTAATGGGGTTGGCGAGGAAGATCAGAGAGGAGTATAATCACGCCGGTACAGTAGCCGAGCAGGCGATATCTTCCATAAGAACTGTGTATTCCTTCGTGGGAGAAAGCAAGACCATAGCTGCTTTCTCTGAAGCTTTACAAGGATCTGTTAAATTGGGGCTCAAGCAGGGCTTAGCTAAGGGCTTAGCCATCGGAAGCAACGGCATCGTCTTCGCCATCTGGTCCTTCATGTCTTTTTACGGCAGCACCCTCGTCATGTACCACGGCGCTCAAGGCGGTACCGTTTTCGCTGTCGGAGCTGCCATTGCCGTTGGTGGCCTGTCACCAATGACATGGTTCAGTGAAGCTCTATTATTGACCTGGTTTACTTTAATGAGATGGGGAAGGAGTCCTAAAAGATGTATGAGAAAATGA 1038 0.499 MEGDQETSVAASSVAPKKKKNGSFRSIFMHADMLDWFLMVLGLVGSLGDGFTTPLVLLISSRLMNNIGSGPTIDPNAFTNSINKNAVALLYLAAGSFLTCFLEGYCWTRTGERQAARMRARYLKAVLRQDVAYFDLHVTSTSEVITSVSNDSLVIQDAIAEKVPNFLMNVFMFIGSYVAAFAMLWRLAIVGFPFVVLLVIPGLLYGRTLMGLARKIREEYNHAGTVAEQAISSIRTVYSFVGESKTIAAFSEALQGSVKLGLKQGLAKGLAIGSNGIVFAIWSFMSFYGSTLVMYHGAQGGTVFAVGAAIAVGGLSPMTWFSEALLLTWFTLMRWGRSPKRCMRK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5366g00001 345 Gene3D ABC transporter type 1, transmembrane domain 17 326 IPR036640 GO:0005524|GO:0016020
Pral5366g00001 345 PANTHER ABC TRANSPORTER B FAMILY 7 318 IPR039421 -
Pral5366g00001 345 FunFam ABC transporter B family member 1 26 328 - -
Pral5366g00001 345 Pfam ABC transporter transmembrane region 40 306 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5366g00001 345 SUPERFAMILY ABC transporter transmembrane region 28 310 IPR036640 GO:0005524|GO:0016020
Pral5366g00001 345 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 316 - -
Pral5366g00001 345 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 306 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5366g00001 Pral-Chr5366 10 1727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5366g00001 16 316 Calmodulin-binding Proteins AT2G36910 36.184 7.18e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5366g00001 K05658 - gmx:100807709 469.159