Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5365g00005 ATGGAGGGGGATCAGGAAACAAGTGTGGCTGCATCTTCAGTGGCTCCCAAGAAGAAGAAGAATGGGTCCTTTCGATCCATTTTCATGCACGCCGATATGTTAGATTGGTTCCTCATGGTCCTTGGCCTTGTTGGGTCCCTCGGCGACGGTTTCACCACTCCTCTCGTCCTTCTCATCAGTAGCCGCTTGATGAACAATATAGGCTCTGGTCCTACCATCGATCCGAATGCTTTTACAAATTCCATTAATAAGAATGCGGTGGCCCTGCTATATTTGGCTGCTGGCTCATTCCTCACTTGCTTCCTCGAGGGGTATTGCTGGACCAGAACAGGGGAAAGGCAAGCTGCCAGAATGAGAGCTAGGTATTTGAAAGCGGTGCTCAGACAGGATGTTGCTTACTTTGATCTGCACGTGACGAGCACGTCGGAGGTGATCACCAGCGTCTCCAACGACAGCCTTGTAATTCAAGATGCTATTGCTGAGAAGGTGCCAAACTTCTTGATGAACGTGTTTATGTTCATCGGGAGCTACGTAGCGGCTTTCGCGATGTTATGGAGGCTGGCTATTGTGGGGTTCCCATTCGTGGTGCTGCTCGTGATCCCTGGTTTACTCTACGGAAGGACTCTAATGGGGTTGGCGAGGAAGATCAGAGAGGAGTATAATCACGCCGGTACAGTAGCCGAGCAGGCGATATCTTCCATAAGAACTGTGTATTCCTTCGTGGGAGAAAGCAAGACCATAGCTGCTTTCTCTGAAGCTTTACAAGGATCTGTTAAATTGGGGCTCAAGCAGGGCTTAGCTAAGGGCTTAGCCATCGGAAGCAACGGCATCGTCTTCGCCATCTGGTCCTTCATGTCTTTTTACGGCAGCACCCTCGTCATGTACCACGGCGCTCAAGGCGGTACCGTTTTCGCTGTCGGAGCTGCCATTGCCGTTGGTGGCCTATCTTTAGGGGCGGCTTTATCGAACATGAAGTACTTCTCTGACGCGAGTACGGCAGGGGAACGCATAATGGAGGTGATCAAAAGAGTGCCGAAGATTGATTCGGACAACATGAGTGGGGAGATCCTGGAGAGCGTTTCAGGGGAAGTGGAATTCGATCACGTACAATTCGCGTACCCATCCAGAAGAGGAAGCATAATCCTGAACGATTTCTGCCTGAAGGTTCCAGCTGGGAAGACGATGGCCTTAGTGGGTGGGAGTGGATCAGGAAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGACCCACTTGTGGGAGAGATAAGGCTGGATGGTGTGCCCATTCACAAGATGCAGCTCAAGTGGCTGAGGTCACAGATGGGTCTGGTCAGCCAAGAGCCTGCTCTGTTCGCCACCAGCATCAAGGAGAACGTTCTCTTTGGAAAGGAAGATGCTTCCATGGAAGAGGTCATTGAAGCTGGCAAAGCTTCTAATGCGCATAATTTCATTTCCCACCTGCCTCAGGGGTACGATACTCAGGTAGGCGAAAGAGGAATTCAAATGTCAGGGGGCCAAAAGCAGAGGATCGCCATTGCGCGAGCAATAATAAAGAAACCGAGACTGCTTCTGCTAGATGAAGCAACCAGTGCATTAGATTCTGAATCAGAGCGAGTTGTTCAAGAAGCTCTGGACAAAGCAGCCGTGGGTCGCACCACAATCATCATCGCTCACCGTTTATCCACCATCCGAAACGCCGACGTCATTGCCGTCGTCCAGAACGGAAAGATCATGGAGATGGGCTCGCACGACGAGCTCATGCAGAACGACGATGGCCATTACACATCTTTGGTTCGTCTTCAGCAGACAGAACAATTCAAAACCCAACAAGAAGATACTGTCTCTGCCCCGTCGTCTATATCAAACAGGGACATGAACAACACTAGTAGCCGTAGGCTTTCCCTGGTGAGTCGTTCTAGCTCTGCTAATTCAATGGCACGGAATCCAGCTTCGGTTGCTGATGAAGACGATGGCCATCATGTTACAGAAGAACAGAAATTCCCTGTTCCTTCTTTTCGGAGATTGTTGGCTCTTAATCTCCCAGAGTGGAAGCAGGCAACTATGGGGTGTATAAGTGCTATTCTCTTTGGTGCGGTTCAGCCATTGTATGCATTCGCAATGGGTTCTATGGTATCTGTGTATTTCTTGACGGACCACGATGAGATAAAAAAGAAGACGAGAACTTATGTTCTCTGCTTTTTGGGGTTGGCTATCTTCTCTTTACTTATTAATATAAGCCAGCATTATTATTTTGCTTACATGGGAGAGTACCTGACCAAAAGGGTTAGAGAGAGAATGCTCTCCAAAATTCTCACGTTTGAAGTCGGATGGTTCGATCAGGACGAAAATTCCAGCGGTGCTATTTGCTCTCGACTCGCCAAAGACGCCAATGTGGTGAGGTCCTTGGTGGGGGATAGAATGGCTCTACTGGTACAAACTTGTTCGGCAGTGACAATAGCCTGCACAATGGGGCTGGTCATTGCATGGAGGCTGGCCATTGTTATGATAGCCATTCAGCCTCTTATCATCGCTTGCTATTACACAAGGCGGGTCCTTCTCAAGAGCATGTCTAGCAAAGCCATCAAAGCCCAAGAGGAAAGCAGCAAGTTAGCTGCCGAAGCGGTTTCAAATCTTCGGACCGTCACTGCCTTCTCTTCACAAGATCGCATATTGAAAATGCTCCAAAACGCTCAAGAAGGCCCGAGCCAAGAGAGTATACGTCAATCCTGGTACGCAGGTATAGGCCTCGGATCTTCCCAAGGCCTTATGTCTTGTACTTGGGCTTTAGACTTTTGGTATGGCGGCAAGCTTATCTCCCAAGGTTACATCACTGCCAAAGCACTGTTCGAGACCTTCATGATCTTGGTCAGCACTGGACGAGTTATTGCTGATGCCGGAAGTATGACTTCGGACCTTGCTAAGGGTGCCGACTCAGTGGGCTCTGTTTTTGCAGTCCTAGACAAATACACTCAAATTGAACCCCAAGACCCAGATGGGTACAAGCCTGAGAAGATAACGGGGCAGATCGAACTCCGTGATGTTCATTTTGCGTACCCAGCTAGGCCCGACGTGATGATCTTTGAAGGATTTTCCCTCAGAATCGATGCTGGGAAATCAACAGCACTAGTTGGCCAAAGCGGGTCTGGCAAATCAACCATTATCGGGTTAATAGAGCGATTCTATGACCCGCTGAAAGGAACAGTGACCATCGACGGCAAAGACATAAGGTCGTATCAACTCAGAGCACTCAGGGAGCATATAGCATTGGTGAGTCAAGAGCCCACGTTATTCAGTGGGACCATAAGAGAGAACATCGCATACGGAGCGTCGGATAAGGTAGGTGAAGCGGAGATCATAGAAGCAGCGAGAGCAGCGAACGCTCATGATTTCGTAGGAAGCCTGAAGGACGGATACGACACGTCGTGTGGGGACAGAGGTGTGCAGCTATCGGGAGGGCAGAAGCAGAGGATAGCGCTCGCTAGGGCGATTTTGAAGAACCCAACGGTGTTGCTATTAGACGAGGCGACGAGCGCGCTGGACAGCCAATCGGAGAAGGTGGTGCAAGAAGCACTGGAGAGGGTGATGGTGGGGAGGACGAGCGTGGTGGTGGCCCACAGGCTGAGCACCATACAAAACTGTGATCTGATTGCTGTGTTGGATAAAGGGAAAGTGGTGGAGAAAGGGACCCACTCATCTCTGTTAGCTAAGGGACCAACCGGAGCTTATCACTCTTTGGTCACTCTTCAGAGAACGCCGTCGAACGCCGTTCCCTGCACTGGCCGAGTCTAA 3792 0.4984 MEGDQETSVAASSVAPKKKKNGSFRSIFMHADMLDWFLMVLGLVGSLGDGFTTPLVLLISSRLMNNIGSGPTIDPNAFTNSINKNAVALLYLAAGSFLTCFLEGYCWTRTGERQAARMRARYLKAVLRQDVAYFDLHVTSTSEVITSVSNDSLVIQDAIAEKVPNFLMNVFMFIGSYVAAFAMLWRLAIVGFPFVVLLVIPGLLYGRTLMGLARKIREEYNHAGTVAEQAISSIRTVYSFVGESKTIAAFSEALQGSVKLGLKQGLAKGLAIGSNGIVFAIWSFMSFYGSTLVMYHGAQGGTVFAVGAAIAVGGLSLGAALSNMKYFSDASTAGERIMEVIKRVPKIDSDNMSGEILESVSGEVEFDHVQFAYPSRRGSIILNDFCLKVPAGKTMALVGGSGSGKSTVISLLQRFYDPLVGEIRLDGVPIHKMQLKWLRSQMGLVSQEPALFATSIKENVLFGKEDASMEEVIEAGKASNAHNFISHLPQGYDTQVGERGIQMSGGQKQRIAIARAIIKKPRLLLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADVIAVVQNGKIMEMGSHDELMQNDDGHYTSLVRLQQTEQFKTQQEDTVSAPSSISNRDMNNTSSRRLSLVSRSSSANSMARNPASVADEDDGHHVTEEQKFPVPSFRRLLALNLPEWKQATMGCISAILFGAVQPLYAFAMGSMVSVYFLTDHDEIKKKTRTYVLCFLGLAIFSLLINISQHYYFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRMALLVQTCSAVTIACTMGLVIAWRLAIVMIAIQPLIIACYYTRRVLLKSMSSKAIKAQEESSKLAAEAVSNLRTVTAFSSQDRILKMLQNAQEGPSQESIRQSWYAGIGLGSSQGLMSCTWALDFWYGGKLISQGYITAKALFETFMILVSTGRVIADAGSMTSDLAKGADSVGSVFAVLDKYTQIEPQDPDGYKPEKITGQIELRDVHFAYPARPDVMIFEGFSLRIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGTVTIDGKDIRSYQLRALREHIALVSQEPTLFSGTIRENIAYGASDKVGEAEIIEAARAANAHDFVGSLKDGYDTSCGDRGVQLSGGQKQRIALARAILKNPTVLLLDEATSALDSQSEKVVQEALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLAKGPTGAYHSLVTLQRTPSNAVPCTGRV 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5365g00005 1263 Pfam ABC transporter 1030 1178 IPR003439 GO:0005524
Pral5365g00005 1263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1010 1247 IPR003439 GO:0005524
Pral5365g00005 1263 FunFam ABC transporter B family member 4 354 611 - -
Pral5365g00005 1263 Pfam ABC transporter transmembrane region 689 957 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5365g00005 1263 Pfam ABC transporter transmembrane region 40 306 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5365g00005 1263 SUPERFAMILY ABC transporter transmembrane region 669 989 IPR036640 GO:0005524|GO:0016020
Pral5365g00005 1263 Pfam ABC transporter 382 531 IPR003439 GO:0005524
Pral5365g00005 1263 CDD ABC_MTABC3_MDL1_MDL2 1010 1250 - -
Pral5365g00005 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 357 602 IPR027417 -
Pral5365g00005 1263 FunFam ABC transporter B family member 1 26 363 - -
Pral5365g00005 1263 CDD ABC_MTABC3_MDL1_MDL2 364 602 - -
Pral5365g00005 1263 ProSitePatterns ABC transporters family signature. 1150 1164 IPR017871 GO:0005524|GO:0016887
Pral5365g00005 1263 Gene3D ABC transporter type 1, transmembrane domain 633 923 IPR036640 GO:0005524|GO:0016020
Pral5365g00005 1263 CDD ABC_6TM_Pgp_ABCB1_D2_like 677 993 - -
Pral5365g00005 1263 FunFam Putative ABC transporter B family member 8 653 998 - -
Pral5365g00005 1263 Gene3D - 1000 1251 IPR027417 -
Pral5365g00005 1263 Gene3D - 354 603 IPR027417 -
Pral5365g00005 1263 ProSitePatterns ABC transporters family signature. 503 517 IPR017871 GO:0005524|GO:0016887
Pral5365g00005 1263 Gene3D ABC transporter type 1, transmembrane domain 926 999 IPR036640 GO:0005524|GO:0016020
Pral5365g00005 1263 FunFam ABC transporter B family member 4 1000 1255 - -
Pral5365g00005 1263 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 40 329 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5365g00005 1263 SMART AAA_5 1037 1230 IPR003593 GO:0016887
Pral5365g00005 1263 SMART AAA_5 391 577 IPR003593 GO:0016887
Pral5365g00005 1263 Gene3D ABC transporter type 1, transmembrane domain 27 610 IPR036640 GO:0005524|GO:0016020
Pral5365g00005 1263 MobiDBLite consensus disorder prediction 609 664 - -
Pral5365g00005 1263 MobiDBLite consensus disorder prediction 609 649 - -
Pral5365g00005 1263 PANTHER ABC TRANSPORTER B FAMILY 8 740 IPR039421 -
Pral5365g00005 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1250 IPR027417 -
Pral5365g00005 1263 SUPERFAMILY ABC transporter transmembrane region 34 348 IPR036640 GO:0005524|GO:0016020
Pral5365g00005 1263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 364 600 IPR003439 GO:0005524
Pral5365g00005 1263 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 690 975 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral5365g00005 1263 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5365g00005 Pral-Chr5365 29651 35637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5365g00005 16 1251 Calmodulin-binding Proteins AT2G36910 45.236 0.0 1076