Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5362g00013 ATGACGATGATCGATAATTTCCTAATTTCCCGAGTCAGCGAAGATGCTCAGGATCCTCTGTTACCTTTCCTTCGGTCCATTAGGGAAGCTCTTGAAGATCCCATCTCCGGCCGAACATCCAATTTGGGTCTCGTAACCCTTCTACAAGATTGCGTCAGAAAGTTCAAGCACAATGTCCAGTACAGCAATGACATTAGATTTCTTAAGATTTGGCTCCTATATATGGATGCTAGTCAGGATTTTAATAATGTGTTCAAAGAATTGCTGGATAGTAATGTATGTGCCAACCATTCTTCACTTTATGTATGGTCTGCATATTTTTTTGAATCCAAAGGGAGATTGCACGACGCTCACACGGTCTATCAGCTTGGCATCTCCAGGAATGCAGAACCAATTGAATGGTTAAAGAAAGCGCATAAGTTGTTCCTCAATAGAATATCTGAAATAGTGACTGTTGCTCAACGTCAGAAGATAGACGACAATGGATCCATGAAATTTGAAAACGGCGCCATCAATCCATGGAGCCCCTCAATCATGAATGATCTATTGAAGAGGATACGTGCTTTGATCACAAAATTTGATGGGTATCATTCAAGTAACAAAGCTTACGCCGGAAAAGTTGCCTTATCTTCTTTGAAGAATTCATCAAGGAATAAAATTGTGGAGATAGGTGGAAAGAAGTATCAAATCAAGGGTTGTGCCGGACAAGGTGGTTTTGCTCAAGTATACAAGGCATATGTTAATAGTAATCCCGATGAAGTTGTCGCACTGAAGATCCAAAAACCAGCATTCCCTTGGGAATTTTACATCTATCGTCTGCTTGATCAACGTATCTTAGAGAGTGAAAGACCAAGCTATGGCTTTGCCCATAGAATTCATATCTATTCTGACTGTAGCGTACTCATCTGTGACTATTTAGCTCATGGGACATTACAGGATGTCATAAATTCATATGCGGTCCTGGGGAAATTCATGGAAGAAGTGCTGTGCATTTATTACACTATAGAAATGCTACATATGCTTGAGACATTACACGATGTTGGCATAATTCATGGTGATTTCAAGCCAGATAACCTGCTTATTCGCTACGCTAGTGGTATCCTTCAAGAAGATGATTTTTTGAACAGAAGTGGTCCTTGGCGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGAATCGATCTACGCCTCTTTACGGATCACACAGTGTTTAATGGAGACTGCAGAACTTCTGGGTTTCGTTGCATTGAGATGCAAGAGAAGAGAACATGGAAATTTCAGGTAGACGCATATGGCCTTTGTGCTGTTGTCCACTTGATGTTGCATAATGCTTATATGGAGATTGTCAAAAAAGAATCATCCGATGGAGGCCACGTTTATCTACCCAGACTGCCGTTTAAACGTTACTGGAACGTTGAGCTCTGGAAGACTTTCTTTACCAAGATGTTAAACCAATACCCTGGCAATGATGATAGAAGGTTGCTGCAGGAGTTGAGAAAGTCCTTCGAGGAATATATGGGCTCCAATCCGCAGCTTATAAAGAAGCTAAAGGAGTTACTGGTGAAGCAAAGGTCTTCCTTGTGTTCTGCTTAG 1596 0.4135 MTMIDNFLISRVSEDAQDPLLPFLRSIREALEDPISGRTSNLGLVTLLQDCVRKFKHNVQYSNDIRFLKIWLLYMDASQDFNNVFKELLDSNVCANHSSLYVWSAYFFESKGRLHDAHTVYQLGISRNAEPIEWLKKAHKLFLNRISEIVTVAQRQKIDDNGSMKFENGAINPWSPSIMNDLLKRIRALITKFDGYHSSNKAYAGKVALSSLKNSSRNKIVEIGGKKYQIKGCAGQGGFAQVYKAYVNSNPDEVVALKIQKPAFPWEFYIYRLLDQRILESERPSYGFAHRIHIYSDCSVLICDYLAHGTLQDVINSYAVLGKFMEEVLCIYYTIEMLHMLETLHDVGIIHGDFKPDNLLIRYASGILQEDDFLNRSGPWRDQGLCLVDWGRGIDLRLFTDHTVFNGDCRTSGFRCIEMQEKRTWKFQVDAYGLCAVVHLMLHNAYMEIVKKESSDGGHVYLPRLPFKRYWNVELWKTFFTKMLNQYPGNDDRRLLQELRKSFEEYMGSNPQLIKKLKELLVKQRSSLCSA 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5362g00013 531 Pfam Protein kinase domain 230 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5362g00013 531 Pfam Mad3/BUB1 homology region 1 13 125 IPR013212 -
Pral5362g00013 531 ProSiteProfiles Protein kinase domain profile. 228 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5362g00013 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Pral5362g00013 531 SMART serkin_6 228 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5362g00013 531 Gene3D Transferase(Phosphotransferase) domain 1 225 529 - -
Pral5362g00013 531 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 167 525 IPR015661 GO:0007094
Pral5362g00013 531 SUPERFAMILY Protein kinase-like (PK-like) 225 504 IPR011009 -
Pral5362g00013 531 SMART mad3_bub1_i 8 125 IPR013212 -
Pral5362g00013 531 Gene3D - 9 162 - -
Pral5362g00013 531 ProSiteProfiles BUB1 N-terminal domain profile. 7 163 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5362g00013 Pral-Chr5362 45138 49500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5362g00013 222 442 AGC Kinase Gene Family AT5G09890 22.047 6.84e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Pral5362g00013 Pkinase 1.3e-11 CL0016