Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5362g00011 ATGGCCAAGGCTGGGTTTGGGACATCAGCAACTGACACAGGAAAAGGAAAAAGCAAAATGTCAAAGCATATCACACATGGCTTCCACTTAATGAAGGGAAAATCAGGCCATGCTATGGAAGATTATTTAGTTTCAGAATTTAAGCAAGAAAAGGACAAAGAGTTAGGATTGTTTGCTATATTTGATGGCCATTTGGGTCATGATGTTGCAAGCTACTTGCAGAACCACCTTTTTGACAACATCTTGAAACAGCCTGACTTCTGGAATGACCCAGAAAGTGCGGTAAGGAGAGCTTATCTTACAACAGACGAGGAAATATTGGGACAAGCACTTGTCTTGGGACGAGGAGGATCAACTGCAGTAACTGCAATACTGATTAATGGTCAGAAGCTCGTAGTAGGGAATGTTGGAGACTCTCGAGCTGTAATTTGCAAGAATGGAAAGGCAGAGCAACTATCAGTTGATCACGAGCCAAGCAAGGAAAAAAGGTTGATCGAGAGCCGTGGTGGTTTTGTGTCAAACATTCCAGGCGACGTCCCTCGTGTGGATGGACAGCTAGCAGTAGCCAGGGCTTTTGGTGATAAGAGCCTGAAGATGCATCTTAGTTCAGAACCTGATGTGGCGATCAAGGAGATAGAAGATGATACAGAATTCCTTATTCTGGCAAGTGATGGAATATGGAAGGTTGTGTCAAACCAAGAAGCAGTGGAGTCTATTAGACAAATAAAGGATGCTCAGGCTGCAGCGAAGCGTTTGATAGATGAGGCCGTTGCTAGGAAGAGCAAGGATGACATATCCTGCATTGTTGTGAGGTTCCAATGA 822 0.4416 MAKAGFGTSATDTGKGKSKMSKHITHGFHLMKGKSGHAMEDYLVSEFKQEKDKELGLFAIFDGHLGHDVASYLQNHLFDNILKQPDFWNDPESAVRRAYLTTDEEILGQALVLGRGGSTAVTAILINGQKLVVGNVGDSRAVICKNGKAEQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVAIKEIEDDTEFLILASDGIWKVVSNQEAVESIRQIKDAQAAAKRLIDEAVARKSKDDISCIVVRFQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5362g00011 273 FunFam Probable protein phosphatase 2C 39 15 273 - -
Pral5362g00011 273 SUPERFAMILY PP2C-like 21 272 IPR036457 -
Pral5362g00011 273 Gene3D - 19 273 IPR036457 -
Pral5362g00011 273 MobiDBLite consensus disorder prediction 1 20 - -
Pral5362g00011 273 SMART PP2C_SIG_2 30 272 IPR001932 -
Pral5362g00011 273 ProSiteProfiles PPM-type phosphatase domain profile. 25 272 IPR001932 -
Pral5362g00011 273 CDD PP2Cc 26 272 IPR001932 -
Pral5362g00011 273 SMART PP2C_4 20 270 IPR001932 -
Pral5362g00011 273 Pfam Protein phosphatase 2C 37 265 IPR001932 -
Pral5362g00011 273 Coils Coil 235 255 - -
Pral5362g00011 273 PANTHER PROTEIN PHOSPHATASE 20 272 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5362g00011 Pral-Chr5362 35688 38189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5362g00011 14 273 PP2C-type Phosphatase Gene Family AT4G28400 75.000 1.32e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5362g00011 K17506 - gmx:100819846 455.292