Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5360g00003 ATGCTTCCTCTTTCTCGCCCCGCCCCGCTTTCCGCCCCTGGTTTCTCTGGCAACTCTGTTTACTCCTCCTCGCCGCCGTCACCTCATCGTGTTCCGATCCGCCCGATCGTCGCCTCCGCCACCGCGACTGAATCTTGCTCAGCCTGGACGGAGCAACCGAGATCGAGGTCCTCCTATCTCACCTCCCATACTATGTCTTCGTGCACATCGCTGTACGATATTCTAGGGATTCCGGCGGGCGCGTCCCATCAGGAAATCAAGGCCGCCTACCGGCGATTGGCGAGAGTGTGTCATCCGGACGTGGCGGCGGTGGATCGGAAGGATTCGTCAGCGGACGCGTTTATGAAGATTCACGCCGCGTACTCCACTCTGTCGGACCCCGAGAAGCGCGCTAGTTACGACAGGAGCCTCTTCGTCCGGCGACAAAGGCCACTGTCCACGGCGTCTTCGGCGTCTTCATATTCCGGTTACAGTGGCCGGAACTGGGAAACTGACCAGTGTTGGTAG 507 0.5996 MLPLSRPAPLSAPGFSGNSVYSSSPPSPHRVPIRPIVASATATESCSAWTEQPRSRSSYLTSHTMSSCTSLYDILGIPAGASHQEIKAAYRRLARVCHPDVAAVDRKDSSADAFMKIHAAYSTLSDPEKRASYDRSLFVRRQRPLSTASSASSYSGYSGRNWETDQCW 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5360g00003 168 PRINTS DnaJ domain signature 72 90 IPR001623 -
Pral5360g00003 168 PRINTS DnaJ domain signature 90 105 IPR001623 -
Pral5360g00003 168 PRINTS DnaJ domain signature 109 129 IPR001623 -
Pral5360g00003 168 Pfam DnaJ domain 71 134 IPR001623 -
Pral5360g00003 168 CDD DnaJ 72 126 IPR001623 -
Pral5360g00003 168 SMART dnaj_3 69 129 IPR001623 -
Pral5360g00003 168 SUPERFAMILY Chaperone J-domain 59 137 IPR036869 -
Pral5360g00003 168 MobiDBLite consensus disorder prediction 149 168 - -
Pral5360g00003 168 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 28 168 - -
Pral5360g00003 168 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Pral5360g00003 168 ProSiteProfiles dnaJ domain profile. 70 137 IPR001623 -
Pral5360g00003 168 Gene3D DnaJ domain 56 157 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5360g00003 Pral-Chr5360 12339 13045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5360g00003 60 134 C2H2 Transcription Factor Family AT1G74250 39.744 3.05e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5360g00003 - - gmx:100800959 197.593