Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00067 ATGAAGTGCTTTTCATTCTACTACGGAGATAAGAAGGATGATCCGAAGAGTATTAAATCAATTTCGGGTCTGTCCAACAGTTCCACATATGGCGAGGGTGATCTGAGAGGATCTGGCTCTGAATTAAATTCTCAAAATGCTTCCGACTATAGCACAGACTCCCTTAGGAGAACTTCGTTTCCCAGTTTGTCTCAGAGGCCCAGCAACCTGAGAGTCTTTACGGTGCCTGAACTGAAATCAGCCACTAAAAATTTTGGCCGCACTGTGATGATCGGAGAGGGTGGGTTTGGGTGTGTCTTCAAGGGATTGATCAAGAGTTTAGAGGACCCACCCAGAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGAAGAGGAATGCAGGGCCATAAGGAATGGGTAACAGAAGTGAATGTTCTTGGCGTTGTTGAGCATCCTAATCTTGTGAAACTTGTGGGTTACTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTCTGGTTTATGAATATATGCCCAACAGAAGTGTGGAACACCATTTTCCCCGATCAGAGATCCCTCTCTCATGGAGTAGGAGATTAAAAATAGCTCAGGATGCAGCTCGTGGCTTAACATATCTTCATGAAGAAATGGATTTTCAGATAATCTTCAGAGATTTCAAATCTTCCAACATCCTTTTGGACGATCAGTGGGAATGCAAAGCTTTCAGATTTGGATTAGCAAGATTGGGCCCATCTGAAGGGTTAACTCATGTTTCAACAGCGGTTGTTGGAACGATGGGATATGCAGCTCCTGAATATATTCAAACTGGACGCCTTACATCAAAAAGTGATGTGTGGAGTTATGGCGTATTTCTCTATGAACTCATAACTGGCAGGCGCCCTGTGGATCGTAACCGTCCCAAGGGTGAACAAAAGCTCTTGGAATGGGTAAGGCCATATCTATCAGATGGGAAAAAATTTCAACTAATATTGGATCCTAGGCTCGACAGGAAACCCCTCTTCAAGTCAGCACAGAGACTTGCCGTTATAGCTAACCGATGCTTGGTCAAAAATCCAAAGAATCGGCCAAAAATGAGTGAGGTATTGGAAATGGTAAATCGACTTGTAGAATCTTCAACGGCCACTAGTCCCCAGATACCCTTGAAGAGTACGGCATCCGCTGAAGTTTCCCAGGGCACTGAAACTAAGAAAAAGAGAAGGATCATGGATCTTAAATCTGGAGAAAATAGTTGGTTTGTTTGGTTGTGGAGACCAAAGCTTTTAAAGGTATGTTGA 1275 0.4337 MKCFSFYYGDKKDDPKSIKSISGLSNSSTYGEGDLRGSGSELNSQNASDYSTDSLRRTSFPSLSQRPSNLRVFTVPELKSATKNFGRTVMIGEGGFGCVFKGLIKSLEDPPRKIEVAVKQLGRRGMQGHKEWVTEVNVLGVVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLXPRSEIPLSWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWECKAFRFGLARLGPSEGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPVDRNRPKGEQKLLEWVRPYLSDGKKFQLILDPRLDRKPLFKSAQRLAVIANRCLVKNPKNRPKMSEVLEMVNRLVESSTATSPQIPLKSTASAEVSQGTETKKKRRIMDLKSGENSWFVWLWRPKLLKVC 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00067 425 FunFam Serine/threonine-protein kinase PCRK2 171 379 - -
Pral5356g00067 425 PANTHER OS01G0588500 PROTEIN-RELATED 52 368 - -
Pral5356g00067 425 Gene3D Phosphorylase Kinase; domain 1 58 170 - -
Pral5356g00067 425 MobiDBLite consensus disorder prediction 9 63 - -
Pral5356g00067 425 Gene3D Transferase(Phosphotransferase) domain 1 171 389 - -
Pral5356g00067 425 MobiDBLite consensus disorder prediction 19 63 - -
Pral5356g00067 425 FunFam Serine/threonine-protein kinase BIK1 52 170 - -
Pral5356g00067 425 SUPERFAMILY Protein kinase-like (PK-like) 59 366 IPR011009 -
Pral5356g00067 425 CDD STKc_IRAK 91 369 - -
Pral5356g00067 425 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Pral5356g00067 425 Pfam Protein tyrosine and serine/threonine kinase 90 364 IPR001245 GO:0004672|GO:0006468
Pral5356g00067 425 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00067 Pral-Chr5356 277922 282335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00067 1 363 Glycoside Hydrolase AT3G07070 42.359 2.04e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5356g00067 PK_Tyr_Ser-Thr 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00067 - - qsa:O6P43_010275 706.827