Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00066 ATGAATGGAATTAAGAACAATGCCTCCTGGGTTGCCCTGGTTTTATTGTTCTATTTAGTTTCTTTAAGTCTGCTCCCGCTGACTCAATGTTCAGACGGGGATAGTACTAATCCCAGCGTGCTTCCAATAGTAACGCAAAAAATCTATGAACGACTCTCAAATGTTACCACAGATTTAACCAAGGATATCAAGGCTACCTTAGGCTTCTGCATAAAGGATGTGAATAGAGATTGGGATGGAGCATTTAATTTCACGGGAAAACTGGACTTTTTGACTGCTTGTATTAAACAGATAAAAGGAGATCTCACCTATCGAATATGTAGCACAGCCGAAATAAGGTTCTACTTCAATTCTTTCAAGAGTCAATCATCGAGTAGCCTAAGACCTAACAGGAATTGCAATTTGACCTCATGGGTGGAAGGCTGTGAACCTGGTTGGCATTGTAGTGTAAGCACAGATGTTGATCCTAAATATTTAAGGGAGTCAAAAGACGTTCCCCTGAGAAACAAGGACTGTCAACCTTGCTGTGAGGGGTTTTTCTGCCCTCGAGGGTTGACTTGCATGATACCTTGCCCACTGGGTTCTTATTGCCCCCTTGGAAAACTGAACAAAACGAGTGGATTATGTTCACCATATCATTACCAGATACCTTCTGGAGCGACAAATCATAGTTGTGGTAGCGCTGATATTTGGACCAATGTTGTCAACAATAGTGATATCTTCTGTTCGCCGGGATCATACTGCCCCACGACGACAAGTAAACTTTCCTGCAGTAAGGGACATTACTGCTGGATGGGTTCCTTGCTTCAAAAGCAATGCTTCAAGTTGAGTACCTGTAATCCAAATACAGCAAACCAGAATATTCATGCTTACGGGGCTTTACTTCTAGCTGCATTAACCGCTGCCCTGCTCATCATTTATAACTGTTCTGATCAAGTTCTGTCAACTCGAGAGAGAAGGCAGGCTAAAAAAAGGGAAGCTGCAGCTAGACATGTGAGGGAAACTGCACAAGCTCGTGAACGGTGGAAATCAGCAAAAGATGTGGCCAAGAAGGGTGCAGCGGGATTACAACAGTCATTCTCACGCACCTTTTCTCGCAGAAAGTCTACGCAACAACCATCTGGGTTCAAGATCTTTAGCACTAAAACCAATACAAGTGACGCTCCAGTTTCATCAATTCCTCTGGATTCTTCAGATGAAGCTTCAAAAGCAAAGAAACCCGGCAAACTTACGCAAATGATGAATTCCATTGAGAATGATCCAAATAGCCATCAGGGATTTCATTTGAATATTGGAAATAAACATACTAAAAAGCAGACAGCAAAAGATTTGCATACTAAGAGCCAAATTTTCAAGTATGCTTATGGTCAGATTGAGAAGGAGAAAGCAATGCAAGATGCAAACAAGAACTTGACTTTCTCCGGAGTGATTTCAATGGCTGCTGGAAATGAAATTAGGAAGAGGCCTCCTATTGAAGTAGCTTTCAAAGACTTAACTCTTACTCTGAAAGGGAAAAACAAACATGTGCTTAGATGTGTGTCAGGAAAAATCAGTCCTGGTCGAGTTTCAGCTGTCATGGGCCCCTCAGGAGCTGGCAAAACCACATTTCTCTCTGCCATTGCAGGAAAAGCAAGAGGTTGTTCTGTGACGGGCTCAATTTTAATTAATGGAAGACATGAATCTATACATTGTTACAAAAAAATTATTGGTTTTGTGCCACAAGATGATATTGTGCATGGCAACCTGACCGTGGAAGAGAATCTTCGTTTCAGTGCAAGATGCAGATTATCTGCGGACTTGCCAAAACCAGATAAGGTTCTAATTATTGAAAGAGTAATTGAATCCTTGGGCCTCCAAGCAGTGAGGGATTCCATAGTTGGAACAGTGGAGAAGCGAGGTATATCTGGAGGACAAAAAAAACGTGTAAATGTAGGGCTAGAGATGGTGATGGAGCCTTCTTTGTTAATATTGGATGAGCCCACAACTGGTCTAGACAGTGCGTCTTCTAGTTTACTTCTTAAAGCACTCCGACGAGAGGCCCTTGAAGGCGTAAACATTTGCATGGTACTTCATCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATTGTATTTCTAGCCAAAGGCGGCTTCACTGCATATCATGGTCCTGTCAAAAAAGTGGAAGAATACTTCGCTGGCATTGGAATCACTGTACCTGATCGGGTGAATCCTCCAGACCATTTCATTGATGTTTTGGAAGGCTTAGTAAAGCCAAGTTCAGGTGTGACTCATCAACAACTCCCAGTGAGATGGATGCTGCATAATGGATATGCAGTACCACCGGATTTGCTACATTTTGCTGATGAAATTGCCGCATCTGGAACTGCATCGACCTCAACTGCAAGTGGCACAAAAAAGGGTACCGATGGAGATGCTGATCAATCCTTTGCCCAGGAGTTTTGGCAGGATGTGAAGAGTAATATGCACATCAAACGAGATCATGTGGAGGAAAATTTAGTGAAGACCAAAGATTTATCTGGCCGAATAACTCCTGGTGTAGCCCGGCAATATAGATACTTCCTTGGGCGGGTTGGTAAGCAGCGGCTACGAGATGCCCAATCACAAGTAGTTGACTATCTCATTTTATTAGTTGCTGGTGCTCTGTTAGGAACTCTTACTGAATCCAACGATGAAACATTTGGGGTCCTTGGTTATACTTACACTGTCATTGCTGTCTCTCTATTATGCAAGATAGCAGCTCTTAGATCATTTTCTTTGGATAAATTAGAGTACTGGAGGGAGAGTGCGGCTGGGATTAGCACTTTGGCTCATTTTCTCTCCAAGGATACAATTGATCTCTTCAACACAATCATCAAACCTGTAGTATATCTCTCCATGTTCTTCTTCTTTAGCAATCCGCGGTCAAGTTTTACAAGTAATTACGTGGTCTTGCTTTGTCTTGTGTATTGTGTGACTGGCATTGCTTATGCAATAGCCATTTACTTCCAACCTGGTCCTGCGCAGCTGTGGGCAGTGCTTCTTCCTGTTGTCATGTCTCTCATTGCGAACCAGCCAAGAGATACTACACTAATGAAGATCCTGGTACAACTGTGCTACCCAAAGTGGGCTCTAGAGGCCTTTGTGATTGCAAACGCTGAGAGGTACTCTGGAGTGTGGTTGATAACTCGTTGCAGTTCACTAATGGCCAATGATTATAATGTCAACGATTGGACTCTTTGTCTAGTTGTGCTGTTTTTGTTTGGTGTCCTCGCTCGAGTGGTAGCCTTCTTTTGTCTTCTTCTATCCCGAAAGAAGTGA 3303 0.4269 MNGIKNNASWVALVLLFYLVSLSLLPLTQCSDGDSTNPSVLPIVTQKIYERLSNVTTDLTKDIKATLGFCIKDVNRDWDGAFNFTGKLDFLTACIKQIKGDLTYRICSTAEIRFYFNSFKSQSSSSLRPNRNCNLTSWVEGCEPGWHCSVSTDVDPKYLRESKDVPLRNKDCQPCCEGFFCPRGLTCMIPCPLGSYCPLGKLNKTSGLCSPYHYQIPSGATNHSCGSADIWTNVVNNSDIFCSPGSYCPTTTSKLSCSKGHYCWMGSLLQKQCFKLSTCNPNTANQNIHAYGALLLAALTAALLIIYNCSDQVLSTRERRQAKKREAAARHVRETAQARERWKSAKDVAKKGAAGLQQSFSRTFSRRKSTQQPSGFKIFSTKTNTSDAPVSSIPLDSSDEASKAKKPGKLTQMMNSIENDPNSHQGFHLNIGNKHTKKQTAKDLHTKSQIFKYAYGQIEKEKAMQDANKNLTFSGVISMAAGNEIRKRPPIEVAFKDLTLTLKGKNKHVLRCVSGKISPGRVSAVMGPSGAGKTTFLSAIAGKARGCSVTGSILINGRHESIHCYKKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADLPKPDKVLIIERVIESLGLQAVRDSIVGTVEKRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGFTAYHGPVKKVEEYFAGIGITVPDRVNPPDHFIDVLEGLVKPSSGVTHQQLPVRWMLHNGYAVPPDLLHFADEIAASGTASTSTASGTKKGTDGDADQSFAQEFWQDVKSNMHIKRDHVEENLVKTKDLSGRITPGVARQYRYFLGRVGKQRLRDAQSQVVDYLILLVAGALLGTLTESNDETFGVLGYTYTVIAVSLLCKIAALRSFSLDKLEYWRESAAGISTLAHFLSKDTIDLFNTIIKPVVYLSMFFFFSNPRSSFTSNYVVLLCLVYCVTGIAYAIAIYFQPGPAQLWAVLLPVVMSLIANQPRDTTLMKILVQLCYPKWALEAFVIANAERYSGVWLITRCSSLMANDYNVNDWTLCLVVLFLFGVLARVVAFFCLLLSRKK 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00066 1100 Gene3D - 483 729 IPR027417 -
Pral5356g00066 1100 MobiDBLite consensus disorder prediction 324 348 - -
Pral5356g00066 1100 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 493 734 IPR003439 GO:0005524
Pral5356g00066 1100 MobiDBLite consensus disorder prediction 324 407 - -
Pral5356g00066 1100 CDD ABCG_EPDR 490 717 - -
Pral5356g00066 1100 Pfam ABC-2 type transporter 691 1100 IPR043926 GO:0140359
Pral5356g00066 1100 FunFam ABC transporter G family member 24 487 729 - -
Pral5356g00066 1100 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 246 1088 - -
Pral5356g00066 1100 SMART AAA_5 519 711 IPR003593 GO:0016887
Pral5356g00066 1100 Pfam ABC transporter 512 661 IPR003439 GO:0005524
Pral5356g00066 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 716 IPR027417 -
Pral5356g00066 1100 ProSitePatterns ABC transporters family signature. 634 648 IPR017871 GO:0005524|GO:0016887
Pral5356g00066 1100 MobiDBLite consensus disorder prediction 356 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00066 Pral-Chr5356 269089 275528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00066 512 710 Calmodulin-binding Proteins AT2G36910 29.469 4.21e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00066 - - gmx:100780238 1536.55