Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00061 ATGGAAGCCGTTGCTAACGTTAACGCCACAGCCGAGAGCTTCTGCCTGAGCGGCGGACGAGCTGCTTCTGACCCACTCAACTGGGGTGTAGCCGCCGAATCACTAAAGGGCAGCCACTTGGACGAGGTGAAGCGCATGGTGGAGGAGTTCCGGAAGCCGGTGGTCCGCCTCGGTGGCGAGACCCTCACCATCTCGCAGGTGGCCGCCATCGCCGCCCACGACCAAGGTGTGAAGGTGGAGCTGTCGGAGTCGGCCAGGGCCGGCGTTAAGGCCAGCAGTGACTGGGTCATGGATAGCATGAACAAAGGCACCGATAGCTACGGCGTCACCACCGGCTTCGGCGCCACTTCTCACAGACGAACCAAGCAAGGCGCTGCTCTGCAGAAAGAGCTTATCAGATTCTTGAACGCTGGAATATTTGGCAACGGCACAGAGTCATGCCACACTCTGCCACACTCAGCAACCAGAGCGGCCATGCTGGTCAGAATCAACACTCTCCTCCAAGGATACTCCGGCATCAGATTCGAGATCCTGGAAGCCATCACCAAATTCCTCAACCACAATACCACCCCATGCCTGCCTCTTCGCGGTACAATCACCGCCTCTGGTGATCTTGTTCCTCTTTCCTACATCGCCGGTTTGCTCACCGGCCGACCCAACTCCAAAGCCGTCGGACCCTCAGGTCAACTCCTTACTCCCAAGGAAGCTTTCCATTTGGCCGGCGTCGATTCTGACTTCTTCGAATTACAGCCCAAGGAAGGCCTTGCTCTGGTCAATGGCACCGCAGTTGGTTCTGGCTTAGCCTCCATGGTTCTCTTTGAGGCCAACATTTTGGCCGTCTTGTCTGAAGTTCTATCGGCAATTTTTGCTGAAGTTATGCAAGGGAAGCCCGAATTTACAGACCATTTGACACATAAATTGAAGCACCATCCTGGTCAAATTGAGGCTGCCGCTATAATGGAACACATTCTTGATGGAAGCTCCTACATTAAAGCAGCTCAGAAATTGCATGAGATTGATCCCTTGCAGAAGCCCAAACAAGATCGCTATGCGCTTCGAACTTCACCCCAATGGCTTGGTCCTCTCGTTGAGGTCATCAGGTTCTCCACCAAATCCATCGAGAGGGAGATCAACTCAGTGAACGACAACCCTTTGATTGACGTTTCAAGGAACAAGGCCCTGCACGGTGGTAACTTCCAAGGAACCCCGATCGGAGTGTCCATGGACAACACTCGTTTGGCTCTCGCATCTATAGGGAAGCTCATGTTCGCTCAGTTTTCTGAGCTGGTCAACGATTTTTACAACAATGGGTTGCCTTCAAATCTCTCTGCGGGTAGAAACCCCAGCTTGGACTATGGTTTCAAGGGTGCTGAAATCGCCATGGCATCTTACTGCTCTGAGCTTCAATATCTTGCGAACCCTGTGACAAGCCACGTCCAAAGTGCCGAGCAACACAATCAGGACGTGAACTCATTGGGTCTGATTTCGTCTCGAAAAACCAATGAAGCTATTGAAATCCTGAAGCTCATGTCTTCGACATACCTCATCGCACTCTGCCAAGCAATTGACTTGAGGCATTTGGAGGAGAATTTGAAGAGCACGGTGAAGAGCACCGTGAGTCAGGTGGCAAAGAGAACTCTCACCACAGGGGTAAACGGAGAACTCCATCCTTCTAGATTCTGTGAGAAAGATCTGCTGAAAGTGGTTGACAGAGAGCACGTATTTGCCTACATCGATGATCCCACCAGTGCTACACCACAGTGA 1764 0.5227 MEAVANVNATAESFCLSGGRAASDPLNWGVAAESLKGSHLDEVKRMVEEFRKPVVRLGGETLTISQVAAIAAHDQGVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNTTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGQLLTPKEAFHLAGVDSDFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPTSATPQ 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00061 587 FunFam Phenylalanine ammonia-lyase 262 567 - -
Pral5356g00061 587 Gene3D - 16 261 IPR024083 -
Pral5356g00061 587 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Pral5356g00061 587 CDD PAL-HAL 60 525 IPR001106 -
Pral5356g00061 587 Pfam Aromatic amino acid lyase 62 535 IPR001106 -
Pral5356g00061 587 Gene3D Fumarase/aspartase (Central domain) 262 582 - -
Pral5356g00061 587 PANTHER HISTIDINE AMMONIA-LYASE 18 585 IPR001106 -
Pral5356g00061 587 NCBIfam phenylalanine ammonia-lyase 24 585 IPR005922 GO:0005737|GO:0006559|GO:0016841
Pral5356g00061 587 SUPERFAMILY L-aspartase-like 24 584 IPR008948 GO:0003824
Pral5356g00061 587 FunFam Phenylalanine ammonia-lyase 16 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00061 Pral-Chr5356 237192 240735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00061 22 585 Monolignol Biosynthesis Gene Families AT2G37040 86.170 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00061 K10775 - gmx:100787902 1043.11