Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00054 ATGGCATCCAACAGAGGTCAGGGTGGAATTCAGCAGTTGTTGGCTGCAGAACAAGAAGCTCAACGGATTATAAATGCTGCCAGAAATGAAAAAATGGCAAGGCTCAAACAAGCCAAAGAAGAGGCTGAAAAGGAAATTGCTGAGTATCGGGCTCAGGTGGAGTATGAATTCCAAAGGAAATTGGCAGAGAGTAGTGGAGATTCCGGTGCTAATGTGAAGCGGCTTGAGCAAGAGACTGAAGCAAAGATCCAGCACCTGAAAACAGAAGCATCAAGGATATCACAAGATGTTGTGGCCATGCTCCTCAAGCATGTGACAAGTGTGAAAAATTAG 333 0.4505 MASNRGQGGIQQLLAAEQEAQRIINAARNEKMARLKQAKEEAEKEIAEYRAQVEYEFQRKLAESSGDSGANVKRLEQETEAKIQHLKTEASRISQDVVAMLLKHVTSVKN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00054 110 Coils Coil 10 59 - -
Pral5356g00054 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pral5356g00054 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pral5356g00054 110 FunFam V-type proton ATPase subunit G 3 110 - -
Pral5356g00054 110 Coils Coil 76 96 - -
Pral5356g00054 110 Gene3D - 1 110 - -
Pral5356g00054 110 NCBIfam V-type ATPase subunit G 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00054 Pral-Chr5356 189810 192325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00054 1 110 Primary Pumps ATPases(2) AT3G01390 80.909 1.90e-50 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00054 K02152 - gmx:100305477 172.17