Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00052 ATGAAGATTCTTTGTTCGTTGTCTACTTGTTTCTCTCCGTCGGTCCAAGACGAAACCGCCAAGCAAGGAAGAGAGAGTGAAGGAGCATTTCGAGTATTCACGTACGGCGAATTGAAATCTGCGACCAGGAGTTTCGATTCCTCAAACAAGATCGGAGAAGGCGGGTTTGGCACTGTGTACAAGGGGCGGCTTCTGGATGGCACATTCGTGGCGGTCAAGGTGCTTTCGATTGAACTGGATTCCCTGCGAGGAGAGAAGGAATTTGTAGCAGAACTGAGCACTCTGGGCAATATCAAGCACGAGAATCTAGTCACTCTTCGAGGTTGTTGTGTGGAAGGAACTGACAGATACTTAGTCTACGAGTTCATGGAAAACAACAGCCTTCGCCAGTACTTTTTAGTTTCAAAGGAGGGCAGAATGAGATTCGACTGGGAATCAAGGAGGGAAGTATCCATTGGAGTGGCTCGAGGGCTTGCGTATCTGCACGAGGAAGTTAAGCCCTATATCGTGCACAGGGACATCAAAGCGAGAAATATACTTCTTGACCGACGTTTGAGGCCAAAAGTTTCCGACTTTGGTCTGGCAAAGTTACTGAGAGACGATAAGTCCTACGTTAGTACCCAAGTCGCAGGGACATTGGGTTATCTTGCTCCGGAATATGCCAGTTCTGGGAAGGTGACTAGAAAATCAGATGTCTACAGCTACGGAATATTACTCCTTGAAATTGTGAGCGGCCTACCTGTGGTTGATCCTTCCCAAGATACAGAACGTTTCCTCGTTGAGAAGGCGTGGGCGGCCTATGAAGCTGGTGATTTACCGAAAATGGTGGATGAAGAGCTAAAGGAGAGCTTCCCAGAGGAAGAAAGCGTCAGATTCCTGAAGGTGGGGCTGCTTTGCGTTCAAGAAACAGCGAAGCTAAGGCCACGAATGACCGAAGTGGTGGAGATGTTGAGCAATAATATTGAAATGGCAAGTGTGAGTATTTCAAAACCAGGGCTTGTGCCTGATCTCAGGGCTATCAGAATTAAAAACGCACCCCATTCTGAGGCATCCACCTCCCGTGCTGCTACCCATGCAAGTTCCATTTGGAGTTCGGCCAATCTTGGCCGTTAA 1113 0.4816 MKILCSLSTCFSPSVQDETAKQGRESEGAFRVFTYGELKSATRSFDSSNKIGEGGFGTVYKGRLLDGTFVAVKVLSIELDSLRGEKEFVAELSTLGNIKHENLVTLRGCCVEGTDRYLVYEFMENNSLRQYFLVSKEGRMRFDWESRREVSIGVARGLAYLHEEVKPYIVHRDIKARNILLDRRLRPKVSDFGLAKLLRDDKSYVSTQVAGTLGYLAPEYASSGKVTRKSDVYSYGILLLEIVSGLPVVDPSQDTERFLVEKAWAAYEAGDLPKMVDEELKESFPEEESVRFLKVGLLCVQETAKLRPRMTEVVEMLSNNIEMASVSISKPGLVPDLRAIRIKNAPHSEASTSRAATHASSIWSSANLGR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00052 370 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 360 - -
Pral5356g00052 370 SUPERFAMILY Protein kinase-like (PK-like) 28 343 IPR011009 -
Pral5356g00052 370 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Pral5356g00052 370 Gene3D Transferase(Phosphotransferase) domain 1 123 329 - -
Pral5356g00052 370 FunFam Cysteine-rich receptor-like protein kinase 2 123 325 - -
Pral5356g00052 370 ProSiteProfiles Protein kinase domain profile. 45 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5356g00052 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pral5356g00052 370 SMART serkin_6 45 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5356g00052 370 FunFam Serine/threonine-protein kinase receptor 15 122 - -
Pral5356g00052 370 Pfam Protein tyrosine and serine/threonine kinase 48 317 IPR001245 GO:0004672|GO:0006468
Pral5356g00052 370 CDD STKc_IRAK 51 317 - -
Pral5356g00052 370 Gene3D Phosphorylase Kinase; domain 1 7 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00052 Pral-Chr5356 177898 180209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00052 32 336 Receptor kinase-like Gene Family AT1G56120 51.307 1.35e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5356g00052 PK_Tyr_Ser-Thr 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00052 - - gmx:100813945 488.804