Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00044 ATGAGCGTCATCGACATTCTAACTAGAGTTGATTCGATCTGTAAGAAGTACGACAAATATGACGTCGACAAGCACAGGGATACTAATGTTTCTGGCGACGATGCCTTTGCTCGACTATACGCCGTCGTCGACGCCGACATCGAGGCTGCTCTTCAGAAAGCAGAAACCGCTTCTAAGGAGAAAAATCGGGCATCTGCCGTGGCAATCAACGCGGAGCTTCGTCGTACCAAGGCTCGGTTGCTGGAGGAAGTCCCCAAGTTGCAGAGGTTGGCGGTCAAAAAGGTGAAGGGGCTTCCACCAGAAGAATTTGCTGCACGTAATGATTTGGTTCTTGCATTGCCAGAGAGGATCCAAGCTATCCCGGATGGGGCTCCAGCTGCCCCAAAGCAAACTGGAGGCTGGGCAGCTTCTGCCTCACGTACCGAAATTAAATTTGATTCAGATGGGCAATTTGACAGTGAATACTTCCAGCAAACTGAGGAATCAAGTGGATTCAGGCAGGAGTATGAAATGCGCAGGATGAAGCAGGATCAAGGTTTGGAAGTAATCTCAGAAGGACTGGATACATTGAAAAACATGGCGCATGATATGAATGAGGAAATGGATAGACAAGTCCCATTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGATCTTAAGAATACCAATGTCAGACTTAAAGACACGGTCAATCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTGTTATTGATTATAATTCTTGGAATTGCTGCTTATCTGTACAATGTACTAAAGAAATGA 798 0.4586 MSVIDILTRVDSICKKYDKYDVDKHRDTNVSGDDAFARLYAVVDADIEAALQKAETASKEKNRASAVAINAELRRTKARLLEEVPKLQRLAVKKVKGLPPEEFAARNDLVLALPERIQAIPDGAPAAPKQTGGWAASASRTEIKFDSDGQFDSEYFQQTEESSGFRQEYEMRRMKQDQGLEVISEGLDTLKNMAHDMNEEMDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00044 265 Pfam SNARE domain 207 256 IPR000727 -
Pral5356g00044 265 FunFam Putative syntaxin-71-like 170 231 - -
Pral5356g00044 265 Gene3D - 170 231 - -
Pral5356g00044 265 Coils Coil 47 67 - -
Pral5356g00044 265 Coils Coil 70 90 - -
Pral5356g00044 265 CDD SNARE_Qc 175 230 - -
Pral5356g00044 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Pral5356g00044 265 PANTHER SYNTAXIN 45 252 IPR045242 -
Pral5356g00044 265 SMART tSNARE_6 165 232 IPR000727 -
Pral5356g00044 265 SUPERFAMILY SNARE fusion complex 164 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00044 Pral-Chr5356 131751 134884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00044 1 264 SNARE and Associated Proteins AT3G09740 77.820 3.73e-155 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00044 K08506 - gmx:100819272 461.455