Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00029 ATGTTGGTACTTTCCTTTGCATTTTCGAGTCCCATCATTGCCACTTTTACATTTTCCCTCTGCTTTTTCAACACTGTCTTCACTTTCGCAGCCACTGAGTTCGACTTTGGCACCTTAACTTTAAGCAGTTTGAAGCTTCTGGGCGACGCCCACTTGCACAATGGCAGCGTAAGCCTCACCAGGGACCTCGCCGTCCCTAACTCTGGCTCTGGCAGAGCTCTCTACTCCAAACCAGTGAGATTTCGCCAGCCTGGCACTCATTCTCCGGCGAGCTTCAAGACTTATTTCTCGTTCTCAGTTACCAACCTGAATCCAGCGTCCATCGGCGGCGGACTCGCTTTCCTGATCGCGCCGGACGATGAAACCATCGGTGACGCCGGTGGTTCTCTTGGCCTCCTTAACCCGGCGAGCGCTGCCTCCCCGGGTTTTCTGGCGGTTGAATTCGACACGCTCATGGACGTACAGTTCAAGGACCTCAACGGAAACCATGTGGGTCTGGACCTTAACAGCATGGTTTCAACGGAAGTTGGTGACTTGGGACCCATCGGAATCGATCTCAAGAGCGGTGATCTTGTGAATGTATGGATCGAGTACGACGGCTCAACCTTGGGCTTTAACATCTGGGTTTCGTACTCCAATCTGAAACCGAAAGACCCGCTTTTGACATTCAATCTCGATCTAAATCAGTACGTTAATGATTTCATGTATGTAGGTTTCTCCGGCTCTACGCAGGGGAGTACCGAGACTCACAGCATCCAATGGTGGAGCTTCAGCTCTTCTTTTGAGTCGTACTCATCTTCCCAGCCGGGTTCATCGGTGACGGCGCCGCCACCGCCAACTGTTACCTTGATGAACCCGACAGCTAATTCCGTCCCGTCGCCGCCTCCATCATTAGGTCCTTCTTCCGGTTCAGCCTCAAGCACCCAACAAAAGGACAGTAAATCGTCCTGCCACAATGAGCTCTGCAAGCAAGGTCCAGGAGCCGTTGCAGGTGTTGTGACGGCGAGTGCTTTCGTTCTGGCTCTGTTCGCTGGCGCATTGTTTTGGGTGTACTCCAAAAAGGTCAAACAAGTCAACAGGTCCGATTCATTTGCGTCAGAAATCATCAAAATGCCAAAAGAATTCAGCTACAAGGAACTCAGGACAGCCACCAAGTGCTTTAATGTCAACAGAATAATTGGTCACGGCGCATTTGGGACGGTCTACAAGGGAATATTACCAGAGAACGGCGACATTGTTGCGGTGAAAAGATGCAGCCATACAGGTCAGGGGAAGAACGAATTCCTATCCGAATTATCAATAATTGGGAGTCTTAGACATCGAAATCTCCTCCGTCTGCAAGGTTGGTGCCACGAGAAAGGAGAAATCTTATTAGTCTATGACTTAATGCCTAATGGGAGTCTCGACAAAGCTCTGTTCGAGGCGAGAATACCACTTCCATGGCCTCAGAGGCGCAAAATTTTGCTGGGCGTCGCCTCCGCTCTGGCCTACTTGCACCAAGAATGCGAAAACCAGGTAATTCACAGGGACGTCAAGACCAGCAACATTATGTTAGACGAAGGGTTCAATGCTCGATTAGGCGACTTCGGATTGGCAAGACAAACGGAACACGACAAGTCCCCTGACGCCACGGTGGCCGCCGGAACAATGGGCTACCTGGCGCCAGAGTATCTCCTAACAGGCAGAGCAACAGAAAAAACTGACGTGTTCAGCTACGGCGCGGTGGTTCTTGAGGTGGCCAGTGGAAGAAGACCCATAGAGAAAGACGGTAACGGGAACAATTTGGTGGAATGGGTATGGAGTTTGCATCGAGAAGGGAGGTTGCTGACGGCGGCTGATCCAAGGCTTGACGGTGAGTTCGAGGAGGAAGAGATGAGGAGGGTGCTGTTGGTTGGGTTAGCCTGCTCGCACCCTGACTCGCTGGCCAGGCCCACCATGCGCGGAGTGGTTCAGATGCTGGTGGGTGAGGCTCAGGTGCCCAGCGTTCCCACGACCAAGCCTGCCCCTACTCTGAGCACCTCCCAGCTCTTGTTGAGTTTACAGGACAGCGTGTCTGACTTCAATGGTCTGATCTCCATCTCGCCTTCGTCGTCGGAGAACAGTTTCAACGGCGGAGACATAGATATAGTGTGA 2133 0.5204 MLVLSFAFSSPIIATFTFSLCFFNTVFTFAATEFDFGTLTLSSLKLLGDAHLHNGSVSLTRDLAVPNSGSGRALYSKPVRFRQPGTHSPASFKTYFSFSVTNLNPASIGGGLAFLIAPDDETIGDAGGSLGLLNPASAASPGFLAVEFDTLMDVQFKDLNGNHVGLDLNSMVSTEVGDLGPIGIDLKSGDLVNVWIEYDGSTLGFNIWVSYSNLKPKDPLLTFNLDLNQYVNDFMYVGFSGSTQGSTETHSIQWWSFSSSFESYSSSQPGSSVTAPPPPTVTLMNPTANSVPSPPPSLGPSSGSASSTQQKDSKSSCHNELCKQGPGAVAGVVTASAFVLALFAGALFWVYSKKVKQVNRSDSFASEIIKMPKEFSYKELRTATKCFNVNRIIGHGAFGTVYKGILPENGDIVAVKRCSHTGQGKNEFLSELSIIGSLRHRNLLRLQGWCHEKGEILLVYDLMPNGSLDKALFEARIPLPWPQRRKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKDGNGNNLVEWVWSLHREGRLLTAADPRLDGEFEEEEMRRVLLVGLACSHPDSLARPTMRGVVQMLVGEAQVPSVPTTKPAPTLSTSQLLLSLQDSVSDFNGLISISPSSSENSFNGGDIDIV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00029 710 FunFam L-type lectin-domain containing receptor kinase VIII.1 463 671 - -
Pral5356g00029 710 Gene3D Transferase(Phosphotransferase) domain 1 463 661 - -
Pral5356g00029 710 SMART serkin_6 387 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5356g00029 710 MobiDBLite consensus disorder prediction 268 319 - -
Pral5356g00029 710 ProSitePatterns Protein kinases ATP-binding region signature. 393 416 IPR017441 GO:0005524
Pral5356g00029 710 FunFam L-type lectin-domain containing receptor kinase VIII.1 30 271 - -
Pral5356g00029 710 ProSiteProfiles Protein kinase domain profile. 387 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5356g00029 710 Gene3D - 28 273 - -
Pral5356g00029 710 Pfam Legume lectin domain 32 263 IPR001220 GO:0030246
Pral5356g00029 710 CDD lectin_legume_LecRK_Arcelin_ConA 48 255 IPR001220 GO:0030246
Pral5356g00029 710 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 265 IPR013320 -
Pral5356g00029 710 CDD STKc_IRAK 393 653 - -
Pral5356g00029 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Pral5356g00029 710 Gene3D Phosphorylase Kinase; domain 1 349 462 - -
Pral5356g00029 710 SUPERFAMILY Protein kinase-like (PK-like) 369 688 IPR011009 -
Pral5356g00029 710 PANTHER - 59 663 - -
Pral5356g00029 710 FunFam L-type lectin-domain containing receptor kinase VIII.1 351 462 - -
Pral5356g00029 710 Pfam Protein kinase domain 388 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5356g00029 710 MobiDBLite consensus disorder prediction 300 315 - -
Pral5356g00029 710 MobiDBLite consensus disorder prediction 272 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00029 Pral-Chr5356 105606 107975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00029 20 688 Receptor kinase-like Gene Family AT3G53380 71.449 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral5356g00029 Pkinase 6.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00029 - - qsa:O6P43_006685 1080.47