Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00027 ATGCGTGGAGACTCGCTTTTTCCTGTTATCACTATTACAAGGATTGCTCTTGGACAATTGGGGGATATGATCAAGAAGTCTGAAACCCAAGGGTTCAACCCAGGCTTAGTAGTCCTTCTGCTTGTTGGTGGGCTGCTATTGACATTCCTCGTTGGAAATTATATACTTTACTCGCTTGCACAGAAGACCCTCCCTCCCAGAAAAAAGAAGCCAGTCTCCAAGAAAAAGATGAAAAGGGAGAGACTGAAGCAAGGTGTCTCCGCACCTGGAGAGTAG 276 0.4601 MRGDSLFPVITITRIALGQLGDMIKKSETQGFNPGLVVLLLVGGLLLTFLVGNYILYSLAQKTLPPRKKKPVSKKKMKRERLKQGVSAPGE 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00027 91 PANTHER DNA-BINDING PROTEIN S1FA2 19 91 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pral5356g00027 91 MobiDBLite consensus disorder prediction 65 91 - -
Pral5356g00027 91 Pfam DNA binding protein S1FA 27 91 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pral5356g00027 91 MobiDBLite consensus disorder prediction 67 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00027 Pral-Chr5356 98767 101897 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pral5356g00027 S1FA 3.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00027 - - pop:18100218 107.071