Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00026 ATGGAGGATGATGCTGAGTTTCCCGGCAATATTCCTCCTTCATTCGATCGCGTGCAGGGGGATATGATCAAGAAGTCTGAAACCCAAGGGTTCAACCCAGGCTTAGTAGTCCTTCTGCTTGTTGGTGGGCTGCTATTGACATTCCTCGTTGGAAATTATATACTTTACTCGCTTGCACAGAAGACCCTCCCTCCCAGAAAAAAGAAGCCAGTCTCCAAGAAAAAGATGAAAAGGGAGAGACTGAAGCAAGGTGTCTCCGCACCTGGAGAGTAG 273 0.4799 MEDDAEFPGNIPPSFDRVQGDMIKKSETQGFNPGLVVLLLVGGLLLTFLVGNYILYSLAQKTLPPRKKKPVSKKKMKRERLKQGVSAPGE 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00026 90 PANTHER DNA-BINDING PROTEIN S1FA2 1 90 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pral5356g00026 90 MobiDBLite consensus disorder prediction 64 90 - -
Pral5356g00026 90 Pfam DNA binding protein S1FA 26 90 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pral5356g00026 90 MobiDBLite consensus disorder prediction 66 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00026 Pral-Chr5356 98767 101897 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pral5356g00026 S1FA 3.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00026 - - gmx:100499820 125.176