Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00016 ATGGGTAGGAAAGGAAATTGGTTTTCTAGCGTGAAGAAAGCTCTCAGTCCTGAATCAAAGAAAAGGGAAGACGAGAGATCAAATAAATCAAAGAAGAAATGGTTTGGAAAGCAAAAATTGCAGACTTCAGATTCGTACTTGGAAACTGATAATGCACCTCCTCTTCCTCCACCAGAAGAGGTCAAATTGACTAACATTGAGAGTGAAAGCAATCGTGCTCCCGATGTTGAAGTTGCAACTGCTGCTACTGATACTGAGGAGCCAGTTCCTGCGGTTCAAACAGCCCCCGTTCCAGTTCAAGCTGCTATCATTCCTCAGTCTTCTAGGAAATTAAGTACTGAAGTAGCAGCAATTAAGATTCAAACAGCTTTTCGAGGATACTTGGCAAGAAGAGCATTGAGGGCTTTAAGAGGCTTGGTTAGGCTGAAATCTCTGATGGAAGGGCCAGTTGTAAAACGCCAAGCTGCTAGTACTCTTCGTTCTATGCAGGCTCTGGCTCGTGTGCAATCTCAGATTCGATCTAGGAGGATCAGAATGCTAGAGGAGAATCAAGCTATTCAGAGACAATTCTTACAGAAACATGCAAAAGAGCTTAGCATCCAGATGGGAGATGAATGGGATGACAGCCTGCAATCAAAGGAACAAATTGAAGCCAAGTTGCTGAGCAAGTACGAGGCCACAGTGAGGAGAGAAAGGGCGCTGGCTTATGCATTCTCTCACCAGCAAAATGGGAAGAATTCATCGAGATCTATAAACCCTGTATTTATGGATCCAACCAACCCAGCATGGGGTTGGAGCTGGCTGGAGCGATGGATGGCAGCCCGGCCCTGGGAAAGCAAAGATGTGAATGACCAGTCGTCGGTCAAAAGCTCGAGCCGCAGCATCACCGGCGGAGAAATCAGTAAATCTTATGCTCGTTACCAGCTCAATTCTGAAAAGCACTCTCCAACGGCCAGCCAAAACCTAGGCTCCCCTAGCTTTCACTCCCACTCAACTCCTTCCAAGGCACTCGCTTCTTCAGCATCAGTTGCCAAAAAACTGAAGAAAGTGAGCCCCAAGGAAACCTCGGTTATTGATGATGACTCTAAAAGCATGGTTAGCGTGCAGTCTGGTTTTCGAAGGCACTCCATTGCTGGATCATCTGTGAGAGATGACGAGAGCCTCTCAAGCTCTCAGGCGGTCCCAAGCTACATGGTGCCAACTCAGTCTACGAAAGCCAAGTTCAAGACACACAGTCCATTAACAGTAGAGAATGAAACAGTAGAGAAGGCATCCTCTGTGACAGCTAAGAAACGGCTTTCGTTCCCTCCTTCACCAGCAAGGCCAAGACGACATTCAGGTCCACCCAAAGTGGAAAGCAGCTTCAATGCAGAGGTCACCGTCGGCAATGGTGTGGCTGGTTGA 1404 0.4736 MGRKGNWFSSVKKALSPESKKREDERSNKSKKKWFGKQKLQTSDSYLETDNAPPLPPPEEVKLTNIESESNRAPDVEVATAATDTEEPVPAVQTAPVPVQAAIIPQSSRKLSTEVAAIKIQTAFRGYLARRALRALRGLVRLKSLMEGPVVKRQAASTLRSMQALARVQSQIRSRRIRMLEENQAIQRQFLQKHAKELSIQMGDEWDDSLQSKEQIEAKLLSKYEATVRRERALAYAFSHQQNGKNSSRSINPVFMDPTNPAWGWSWLERWMAARPWESKDVNDQSSVKSSSRSITGGEISKSYARYQLNSEKHSPTASQNLGSPSFHSHSTPSKALASSASVAKKLKKVSPKETSVIDDDSKSMVSVQSGFRRHSIAGSSVRDDESLSSSQAVPSYMVPTQSTKAKFKTHSPLTVENETVEKASSVTAKKRLSFPPSPARPRRHSGPPKVESSFNAEVTVGNGVAG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00016 467 SMART iq_5 112 134 IPR000048 GO:0005515
Pral5356g00016 467 MobiDBLite consensus disorder prediction 377 423 - -
Pral5356g00016 467 Gene3D - 100 142 - -
Pral5356g00016 467 MobiDBLite consensus disorder prediction 15 31 - -
Pral5356g00016 467 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Pral5356g00016 467 MobiDBLite consensus disorder prediction 377 467 - -
Pral5356g00016 467 PANTHER IQ-DOMAIN 5-RELATED 1 448 - -
Pral5356g00016 467 MobiDBLite consensus disorder prediction 1 77 - -
Pral5356g00016 467 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Pral5356g00016 467 MobiDBLite consensus disorder prediction 311 339 - -
Pral5356g00016 467 MobiDBLite consensus disorder prediction 311 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00016 Pral-Chr5356 58799 63692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00016 1 466 IQD Protein Family AT5G03040 53.455 8.88e-143 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00016 - - gmx:100800080 611.683