Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral5356g00013 | ATGTACGGAACTCCGTTAGAGAGAAACATTGTTGGATATGGCTCCTTGGATCCAAGTGGGTTCATGGATGTAGTGGGCATTTATTTTCCTCAGCAGCTTTTCACAGTCGAACAAAGCTGGCTCGACCTCATGTCTGCTCTCATCTCTTTCTTTTCTTCTCCATCGGGCAAAAACCTAACTTCCCAGGTTAAAAATCATCATGGCAGCTTTGCCTTATCACTTGACTTCCAGCAGTTTCAAAATATATGCCATATTGAGGAATTCTATAAAATGTTAGAGGAGAAACCTAAAATCGCTCTCTTGTGCATGAGCGCTGCAGTTCATAAGGTTCTTAGTGCCATATGGGAGAGTGACCAACTTGAGGATGGTGCAAAAGTAGACATCCGACTGCATAACTGTCCTGAAACTATGATTGCTCTGAAAAACTTAAAAGCAGTATATATTGACAAACTTGTCTCAGTGCGTGGTACTGTTGTGAAGGCCAGCACTGTCAGGCCTCTTGTGATGGATATGAGTTTTGAATGCGGAAAGTGCAAACAAAGAATTAGGCGTATCTTTCCTGATGGAAAATTTTCACCACCATCAATTTGCAATTTGAATGGCTGCAAGAGCAAAATATTTAACCCATTACGATCTACAGCTCAAGCTATAGATTTTCAAAAAATAAGGTTGCAGGAACTCCTAAAACCCGAAGACCATGAAGAAGGACGAGTTCCTCGGACAGTGGAATGTGAGCTCATCCAAGACCTCGTTGATACATGCATACCTGGAGATGTGTTGACTGTCACTGGAATAATAAGGGGAATTAACACTTACATGGATATTGGTGGAGGAAAGTCGAAGAACAGAAGCCAGGGATTTTACTATTTGTATCTCGAAGCTGTTTCCGTGCAAAATTCCAAGTCACAGTCTACAAATGAGGATTTGCAAGACACTAATCCCAAAGCAAGACCGGCTGAGCTGCTTGATTTGTTTTCATTTTCTTCCAGGGATTTAGAGTTTATTGTGAAATTTTCGATGGAGCATGGCTCAGATTTGTTTCGGCAAATTCTTCAATCTATATGCCCATCTATCTATGGGCATGAGCTTGTTAAAGCTGGGATTACGCTGGCATTATTTGGGGGTGTGCGAAAACATTCTATGGATCAGAATAAGGTTCCTGTAAGGGGAGACATTCATGTCATAATTGTCGGTGATCCTGGACTAGGCAAGAGCCAATTGCTACAAGCAGCAGCCGCTGTTTCTCCGCGAGGCATCTATGTCTGTGGTAATGCGACAACTAAAGCCGGCCTCACAGTAGCTGTAGTAAAGGATCCTATGACGAGTGACTATGCTTTTGAGGCCGGGGCTATGGTGTTGGCTGACAGTGGATTGTGTTGCATTGATGAGTTCGATAAAATGTCAGCCGAACATCAGGCTCTACTGGAGGCCATGGAACAACAGTGTGTCTCTATTGCAAAGGCAGGATTGGTGGCAAGTTTATCAGCTCGAACTTCTGTCTTAGCGGCAGCAAATCCAGTCGGTGGTCATTATAACCGCGCGAAGACTGTGAATGAAAACTTGAAAATGAGTGCCGCTCTGCTGTCCCGATTTGATTTAGTTTTCATACTGCTGGACAAACCTGATGAACTTCTGGACAAGCGAGTCTCGGAGCACATCATGTCACTTCATGCTGGTAATGGACAACTAGCAGTCAAAAAGCAACGTAGAGATTTACCTTCTGATTCAAGAATTACGGCACCACAGAATGCTGAAAGCATCGATTTGGGGGTTAGATCTGGTTCTTTAGTTTCAAAGTTGAGACTTGACCCACAACGAGATAGTGGTTTTGTACCATTGCCTACACAACTTCTTCGAAAATACATTGCTTATGCGAGGAGTTTTGTCTTCCCCAGGATGTCCAAGCCCGCAGCAGAAATCCTACAAAAGTTTTACCTTAAGCTGAGAGATCATAATACTTCAGCTGATGGTACACCGATAACGGCAAGGCAACTTGAAAGCCTCGTGAGGCTGGCTGAAGCTCGGGCTCGGCTAGACTTGAGGGAAGAAATAACGGCCCAGGATGCCATGGACGTAGTTGAAATAATGAAGGAATCCCTGTATGATAAATACGTAGATGAGCATGGATTTGTGGATTTTGGACGAAGTGGGGGGATGAGTCAACAGAAAGAGGCGAAACGCTTCCTAAGTGCCCTCAACAAACAATCAGAATTACAGCAGAAAGATTGCTTTTCAATATCTGAAATATATAGTCTGGCGGATAGAATTGGCCTACAAGTGCCTGATATTGACACTTTCATCGATAATTTAAACAGCGTTGGTTATCTACTCAAAAAGGGTCCAAAGACATACCAGGTGTTATCCTCCTCGTATACGCGAAGCCAATCATCTAGGGCAAAGAGCTAA | 2406 | 0.4343 | MYGTPLERNIVGYGSLDPSGFMDVVGIYFPQQLFTVEQSWLDLMSALISFFSSPSGKNLTSQVKNHHGSFALSLDFQQFQNICHIEEFYKMLEEKPKIALLCMSAAVHKVLSAIWESDQLEDGAKVDIRLHNCPETMIALKNLKAVYIDKLVSVRGTVVKASTVRPLVMDMSFECGKCKQRIRRIFPDGKFSPPSICNLNGCKSKIFNPLRSTAQAIDFQKIRLQELLKPEDHEEGRVPRTVECELIQDLVDTCIPGDVLTVTGIIRGINTYMDIGGGKSKNRSQGFYYLYLEAVSVQNSKSQSTNEDLQDTNPKARPAELLDLFSFSSRDLEFIVKFSMEHGSDLFRQILQSICPSIYGHELVKAGITLALFGGVRKHSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAAAVSPRGIYVCGNATTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALLEAMEQQCVSIAKAGLVASLSARTSVLAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVFILLDKPDELLDKRVSEHIMSLHAGNGQLAVKKQRRDLPSDSRITAPQNAESIDLGVRSGSLVSKLRLDPQRDSGFVPLPTQLLRKYIAYARSFVFPRMSKPAAEILQKFYLKLRDHNTSADGTPITARQLESLVRLAEARARLDLREEITAQDAMDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFSISEIYSLADRIGLQVPDIDTFIDNLNSVGYLLKKGPKTYQVLSSSYTRSQSSRAKS | 801 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral5356g00013 | 801 | CDD | MCM8_WHD | 722 | 787 | - | - | |
| Pral5356g00013 | 801 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 62 | 737 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
| Pral5356g00013 | 801 | FunFam | DNA helicase MCM8 isoform X1 | 167 | 218 | - | - | |
| Pral5356g00013 | 801 | Gene3D | - | 140 | 269 | IPR012340 | - | |
| Pral5356g00013 | 801 | SUPERFAMILY | Nucleic acid-binding proteins | 67 | 270 | IPR012340 | - | |
| Pral5356g00013 | 801 | CDD | MCM8 | 350 | 699 | - | - | |
| Pral5356g00013 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 449 | 463 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Pral5356g00013 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 476 | 489 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Pral5356g00013 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 389 | 404 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
| Pral5356g00013 | 801 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 500 | 512 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral5356g00013 | K10737 | - | gmx:100784549 | 1307.35 |
Showing 1 to 1 of 1 entries