Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5356g00009 ATGTCCGTGCAATCTGCGTGGCAGCTTTGTTCATTGGAAATTGCTGCACTGAACTTGGGCAATCATATAGGGAAATGGAGACACCTTGTCTTTCGGGTAAATTTGCCCATATGGACTAAACGCTCTCTGAAAATACACGAGCTCTGTAGAATAGCTCCGCCACCATCTTCACCAAAATCCTCTTTCTCTCTCACCTTCTTCGACTTGCTTTGGCTCAGATTTCATCCTGTCGAGCGTCTCTTCTTCTTCTCGGCTCCTCACTTAAACCCTTCTTTCTTCTTCGATTCCATCGTTCCAAAGCTCAAACTCTCCCTCTCTCTCACTCTGCAACACTTTCTTCCTCTCGCCGGTAGCATCGTTTGGCCCTCCGACTCGCCCAAACCCATCGTTCAATACACTCCCGGAGATGCCGTCTCTCTCACCATAGCTGTTTCTGATTCTGATTTCAACCATGTCTTAAACAAATCCCCTCGTGACGCCTCGCAATCTCGTGCTTTTGTTCCCATGTTGGATTCTTCTGATACATTTGCTTCGGCTATTTCTCTGCAAATCACTCTGTTTCCCAACGATGGATTTTGCATAGGAATCAGCGTACACCATGCTTGTTCAGATGGGAAATCATCGTCTATGTTCATGAAGGCCTGGGCTTATCTCTGTCGAACAGAAGCAGAGAACGATTCTTCTGGTTTGCTCCCTCAAGAACTACAACCATCCTTAGACAGGGAAGTTATAGTCGATCCATGTGGCATTGAAGGTGCATACATCAAAGGGTGGTCAGGTTTAGATCCAACTCAGAAGAAGCCAAGCTTGAAGATTTTGTCCGACATGTTCTCTCCGAAAGTGGAAGACTCAGCTCGAGCCACGTTCGAGCTCAAGCGTGGAGATTTAGACAAGATAAAGGAAAGGGTATTGCAGAAATGGGAAAATCACAAGGAGAAAGATGAAGGAGAAGATTCATCATTTTCAAAGCCTCAAACTTCATCAACCTTTGTGCTTACAGCTGCTTACGTATGGATCTGCTTCGCAAAAGCTAAGGAAAGGACCGAACAAAAGAAAACTAAAGTGTTCCTGGGTTTCGTAGTGGATTGCAGAACCAGGTTAGATCCTCCAATCTCTGAAAACTACTTCGGCAATTGTGTGATGTCTCATATGATAGAAACACAACCAGAAGACTTGACAGAAGATGGGGTTGTCATCGCTGCTAAGAAGATACACAGAAAGATAAGGAAAATACAGAAAGAGAAAGGAGCGCTTGATGGAGCAGAGACGTTGTTTTCTAACGTAGCGTTTTTAAAATTTCACGGTCACCAGCGACGGAGCTTCTCGGAGGCGACCACGGACGGACCTTCTTGTCGAGACGAGCAAAGACAGAGCAAGTGGGGGCTCGGGTTGAAGAAGCCGGACTCTGCTCACGGGGGAATAGGGAGAACGCACATGAATGGAGAGAAAAGTAAAAGGAATATATTCCTTTGTCAGAACGGTCCATAA 1488 0.4577 MSVQSAWQLCSLEIAALNLGNHIGKWRHLVFRVNLPIWTKRSLKIHELCRIAPPPSSPKSSFSLTFFDLLWLRFHPVERLFFFSAPHLNPSFFFDSIVPKLKLSLSLTLQHFLPLAGSIVWPSDSPKPIVQYTPGDAVSLTIAVSDSDFNHVLNKSPRDASQSRAFVPMLDSSDTFASAISLQITLFPNDGFCIGISVHHACSDGKSSSMFMKAWAYLCRTEAENDSSGLLPQELQPSLDREVIVDPCGIEGAYIKGWSGLDPTQKKPSLKILSDMFSPKVEDSARATFELKRGDLDKIKERVLQKWENHKEKDEGEDSSFSKPQTSSTFVLTAAYVWICFAKAKERTEQKKTKVFLGFVVDCRTRLDPPISENYFGNCVMSHMIETQPEDLTEDGVVIAAKKIHRKIRKIQKEKGALDGAETLFSNVAFLKFHGHQRRSFSEATTDGPSCRDEQRQSKWGLGLKKPDSAHGGIGRTHMNGEKSKRNIFLCQNGP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5356g00009 495 MobiDBLite consensus disorder prediction 441 486 - -
Pral5356g00009 495 Gene3D - 39 261 IPR023213 -
Pral5356g00009 495 PANTHER - 43 428 - -
Pral5356g00009 495 Gene3D - 281 447 IPR023213 -
Pral5356g00009 495 Pfam Transferase family 49 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5356g00009 Pral-Chr5356 29056 32120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5356g00009 43 422 Monolignol Biosynthesis Gene Families AT5G48930 24.870 2.81e-18 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5356g00009 - - pcin:129292507 498.049