Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5355g00016 ATGAAGGGATCACAACTCCGCAATGACATAGCGATTGAAGATGGAAGTGAGGAAGCAGAAAGAGCAGTAATTGCAAAACCTGTTGCTTCAAGGCCTACTTGCTCCACCTTTAGACCTGTCTCAAAACCGCTTGCAGGTGCCATTAATGTCTCTTTTTCCTCTGTTCACTCTTATCAAACCTCAGATTCAGCCATCAGACCCAAAACTGTGAGGTCCAGGCCATCCCCATATCACCCCCTTCCTCCTGCTGGTTTTGATTCTTCTCAGAGTGCAAAATCTGACAAGATTTACAAGCCAATGGCAAAAGTTGCATCAAAGACCACTGCTTCTCTCTTGGCAAATATGAGAAATTGCAGTACCGGTCATCATCAGCCTCCACTGCAAGAAAAGTTCAGAGACTATTTACACCCAAAAGTTGATACCCCCCAAGCAACTGAACCCTGTAAGGTGGAGGAAGACACAAAGGCTTTAACATTCGATAACCATGGCGGCCGACCTTCTTATGATGGATTCAAGTGGAGAAAATATGGGCAGAAGCAGGTTAAAGGAACCGAGTACCCGAGGAGTTACTACAAATGCACATATCCTAATTGTGCCGCTAAGAAGAAGGTTGAAAGATCACTTGATGGTCAGATTGCAGAAATAGTATATAATGGTTCACACAATCATTCAAAGCCTCAGCCTCCTAAGCGAAACTCGGCTTTATTATCAGGAGCGGCGGGCGACGAAATGAGTCAAGACAGTGACACAAACAACAATTTATGGAGCAGTGACAATGGAGAGAGGAAAGAAGGAAAAACTCCTCTGTTAGATGGTGGGGGAGGAGGCCTTGAGAATTCGTGCGCTCAAACTGGGTATTGCGAGGAAGGAGGAAGAAAGGAGTTTGAGGCGGAGGAAGAGCCTAGAAGCAAAAGAAGGAAAAACGAGAGTAGCAAATCCTATGAAATAGCAGTTTCAGAGGAAGGTGAAGGGCCTGGAGGAGTGGTGCCAAATTATGCAGATTCAGAAATAGTAGGGGATGGGTTCCGCTGGAAACAATATGGGCAGAAGGCTGTGAAGGGCAATCCATATCCCAGAAGTTACTATAGCTGTACTAACATGAAGTGTAAGGTGCGAAAACATGATGAAAGAGCAATAGATGAGCCAGGAGCAGTTAGGACCAAGTACGAGGGAAAGCACAACCATGAGATGCCTTGA 1197 0.4545 MKGSQLRNDIAIEDGSEEAERAVIAKPVASRPTCSTFRPVSKPLAGAINVSFSSVHSYQTSDSAIRPKTVRSRPSPYHPLPPAGFDSSQSAKSDKIYKPMAKVASKTTASLLANMRNCSTGHHQPPLQEKFRDYLHPKVDTPQATEPCKVEEDTKALTFDNHGGRPSYDGFKWRKYGQKQVKGTEYPRSYYKCTYPNCAAKKKVERSLDGQIAEIVYNGSHNHSKPQPPKRNSALLSGAAGDEMSQDSDTNNNLWSSDNGERKEGKTPLLDGGGGGLENSCAQTGYCEEGGRKEFEAEEEPRSKRRKNESSKSYEIAVSEEGEGPGGVVPNYADSEIVGDGFRWKQYGQKAVKGNPYPRSYYSCTNMKCKVRKHDERAIDEPGAVRTKYEGKHNHEMP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5355g00016 398 SUPERFAMILY WRKY DNA-binding domain 332 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 MobiDBLite consensus disorder prediction 57 93 - -
Pral5355g00016 398 ProSiteProfiles WRKY domain profile. 169 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 MobiDBLite consensus disorder prediction 378 398 - -
Pral5355g00016 398 MobiDBLite consensus disorder prediction 243 258 - -
Pral5355g00016 398 MobiDBLite consensus disorder prediction 291 316 - -
Pral5355g00016 398 SMART WRKY_cls 338 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 SMART WRKY_cls 167 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 118 398 IPR044810 GO:0003700
Pral5355g00016 398 MobiDBLite consensus disorder prediction 219 277 - -
Pral5355g00016 398 ProSiteProfiles WRKY domain profile. 333 398 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 FunFam WRKY transcription factor 156 227 - -
Pral5355g00016 398 Pfam WRKY DNA -binding domain 169 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 Pfam WRKY DNA -binding domain 340 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 Gene3D WRKY domain 156 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 Gene3D WRKY domain 326 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5355g00016 398 MobiDBLite consensus disorder prediction 291 332 - -
Pral5355g00016 398 SUPERFAMILY WRKY DNA-binding domain 166 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5355g00016 Pral-Chr5355 56064 57997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5355g00016 324 398 WRKY Transcription Factor Family AT2G37260 44.578 4.47e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5355g00016 WRKY 5.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5355g00016 - - pcin:129305131 545.428