Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5355g00015 ATGGGCTGGATTCCATGTTCTGGAAATCCAACCGGTAAGAAAAAGAGAAAGAATAAGATAAAGAAGACGGAAGTGCAGGAGAATAGGGTAGATCAAACCAAGACAACTCCAGGGAAGTTGAAGAGGAACTCATCCACTAGTTCCAAAGATACCTCTAAAAATGGGAATTCTGATCACATTGCGGCTCAGACTTTCACATTCCGTGAGTTGGCGACTGCAACTAAAAATTTTAGGACAGAAAGTCTTTTGGGAGAGGGAGGATTTGGCAGGGTATACAAGGGGCGTTTGGAAAGTTCTAATCAGGTTGTCGCGATAAAGCAACTTGACCGAGATGGGCTGCAAGGAAATAGAGAATTCCTTGTTGAAGTATTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGATATTGTGCTGATGGAGATCAAAGGCTTCTAGTTTATGAATACATGCCATTAGGATCCTTGGAAGATCACTTATATGATATTTCTCCTGCCAAAAAACGGCTTGACTGGAACACGCGAATGAAAATTGCTGCTGGGGCGGCCAAGGGATTGGAATATCTGCATGACAAAGCAAACCCTCCTGTCATATACCGAGACTTAAAGTGTTCAAACATTTTGCTTGGGGAGGGGTATCATCCAAAGTTATCTGATTTTGGTTTGGCTAAACTTGGACCTGTTGGGGAAAACACCCACGTATCCACAAGGGTTATGGGTACCTATGGATATTGTGCTCCAGAATATGCCATGACTGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGCATAGTTCTGCTGGAAATAATTACAGGAAGGAAAGCCATTGACAGTTCAAAAGCTGCGGGGGAGCAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAAGATCGAAGAAAATTTTCACAGATGGCTGATCCAATGCTTCAAGGTCAGTATCCTCCCCGAGGCTTATATCAAGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAAGCAAATATGCGGCCAGTTATAGCTGATGTCGTCACTGCCTTGTCTTATCTTGCTTCCCAAAGGTATGATAGCAATTCGCACTCTCTTCATAGCCCACGCCTTGCCCCTGCTACGCCTACAACCAGGAGAGGAAGATGA 1149 0.4404 MGWIPCSGNPTGKKKRKNKIKKTEVQENRVDQTKTTPGKLKRNSSTSSKDTSKNGNSDHIAAQTFTFRELATATKNFRTESLLGEGGFGRVYKGRLESSNQVVAIKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLYDISPAKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGIVLLEIITGRKAIDSSKAAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDSNSHSLHSPRLAPATPTTRRGR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5355g00015 382 MobiDBLite consensus disorder prediction 1 58 - -
Pral5355g00015 382 PANTHER OS07G0668900 PROTEIN 24 363 - -
Pral5355g00015 382 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Pral5355g00015 382 CDD STKc_IRAK 83 351 - -
Pral5355g00015 382 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5355g00015 382 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5355g00015 382 MobiDBLite consensus disorder prediction 361 382 - -
Pral5355g00015 382 SUPERFAMILY Protein kinase-like (PK-like) 59 351 IPR011009 -
Pral5355g00015 382 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Pral5355g00015 382 Gene3D Transferase(Phosphotransferase) domain 1 154 370 - -
Pral5355g00015 382 MobiDBLite consensus disorder prediction 30 58 - -
Pral5355g00015 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pral5355g00015 382 Pfam Protein tyrosine and serine/threonine kinase 80 350 IPR001245 GO:0004672|GO:0006468
Pral5355g00015 382 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Pral5355g00015 382 PIRSF ILK 13 366 - -
Pral5355g00015 382 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5355g00015 Pral-Chr5355 50210 53506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5355g00015 31 356 Glycoside Hydrolase AT3G07070 66.564 6.31e-165 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral5355g00015 PK_Tyr_Ser-Thr 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5355g00015 - - gmx:100818024 667.151