Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5355g00004 ATGGTCAAGTCATGCTGGAAACCATCTGTGGAAGGTGAAGATGGAGAAGGGAGTGGGAAGGTTGATGGATTGCTATGGCACAAGGATTTAGGCAATCATCTGTATGGGGATTTCTCAATGGCCGTAGTTCAGGCCAATAGTTCATTGGAGGATCGAAGTCAGCTCGAATCTGGACCCTTCACTTGCAATAATGATAATATGGGTCCTCAAGGCACCGTCATAGGTGTCTACGACGGTCATGGTGGCTACGAGGCCTCCCAGTTCGTCACCGACAATCTCTTCTCTAATCTCAAGAGACTTGCAGGCGAAGAAGGAGGCATGGCAGAGAGTGTTATAAAGAAGGCGTATCGAGCAACAGACGAAGGATTTCTGTCTATGGTGAAGAGAAAGTGGATGAGCAAGCCAGAGATTGCTTCCACAGGGACGTGTTGCTTAGTGGGGATAATCTGTAATGGGATGATATATATAGCAAATTCTGGAGACTCCCGAGCGGTGCTGGGAAGAATGGAGAGGGCAACGAAAGAAGTAGTAGCTATTCAACTATCCGCAGAACACAACGTTAACATAGAAACAGTAAGAGATGAAGTTCGATCAAAGCACCCCTTTGATTCACAAATTGTGGTCCTGAAACATCAAGTTTGGCGCGTCAAAGGCCTCATTCAGGTTTCGAGATCCATAGGTGATGCATATCTGAAAAAGGCAGAATTTAACAGAGAGCCTCTGCCATTGAGGTTTAGATTGGCGGAATCCTTCTTCAAGCCTATTCTCAGCTGTGAGCCGTCAATAGCAACGCAGAAACTCCATCCTGACGATCACTTTCTCATATTTGCTTCGGACGGTTTGTGGGAGCACCTTAGCAACCAAGAAGCCGTTAACATGGTCAATAATAACCCACGTAATTGA 903 0.4618 MVKSCWKPSVEGEDGEGSGKVDGLLWHKDLGNHLYGDFSMAVVQANSSLEDRSQLESGPFTCNNDNMGPQGTVIGVYDGHGGYEASQFVTDNLFSNLKRLAGEEGGMAESVIKKAYRATDEGFLSMVKRKWMSKPEIASTGTCCLVGIICNGMIYIANSGDSRAVLGRMERATKEVVAIQLSAEHNVNIETVRDEVRSKHPFDSQIVVLKHQVWRVKGLIQVSRSIGDAYLKKAEFNREPLPLRFRLAESFFKPILSCEPSIATQKLHPDDHFLIFASDGLWEHLSNQEAVNMVNNNPRN 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5355g00004 300 ProSiteProfiles PPM-type phosphatase domain profile. 34 300 IPR001932 -
Pral5355g00004 300 SMART PP2C_4 31 298 IPR001932 -
Pral5355g00004 300 CDD PP2Cc 35 299 IPR001932 -
Pral5355g00004 300 Pfam Protein phosphatase 2C 67 297 IPR001932 -
Pral5355g00004 300 PANTHER PROTEIN PHOSPHATASE 27 298 IPR015655 GO:0004722|GO:0006470
Pral5355g00004 300 Gene3D - 27 300 IPR036457 -
Pral5355g00004 300 ProSitePatterns PPM-type phosphatase domain signature. 73 81 IPR000222 GO:0043169
Pral5355g00004 300 SUPERFAMILY PP2C-like 47 296 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5355g00004 Pral-Chr5355 17407 19109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5355g00004 1 300 PP2C-type Phosphatase Gene Family AT3G12620 63.366 2.21e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5355g00004 K01102 - gmx:100819870 490.73