Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5355g00003 ATGGTCAAGTCATGCTGGAAACCATCTGTGGAAGGTGAAGATGGAGAAGGGAGTGGGAAGGTTGATGGATTGCTATGGCACAAGGATTTAGGCAATCATCTGTATGGGGATTTCTCAATGGCCGTAGTTCAGGCCAATAGTTCATTGGAGGATCGAAGTCAGCTCGAATCTGGACCCTTCACTTGCAATAATGATAATATGGGTCCTCAAGGCACCGTCATAGGTGTCTACGACGGTCATGGTGGCTACGAGGCCTCCCAGTTCGTCACCGACAATCTCTTCTCTAATCTCAAGAGACTTGCAGGCGAAGAAGGAGGCATGGCAGAGAGTGTTATAAAGAAGGCGTATCGAGCAACAGACGAAGGATTTCTGTCTATGGTGAAGAGAAAGTGGATGAGCAAGCCAGAGATTGCTTCCACAGGGACGTGTTGCTTAGTGGGGATAATCTGTAATGGGATGATATATATAGCAAATTCTGGAGACTCCCGAGCGGTGCTGGGAAGAATGGAGAGGGCAACGAAAGAAGTAGTAGCTATTCAACTATCCGCAGAACACAACGTTAACATAGAAACAGTAAGAGATGAAGTTCGATCAAAGCACCCCTTTGATTCACAAATTGTGGTCCTGAAACATCAAGTTTGGCGCGTCAAAGGCCTCATTCAGGTTTCGAGATCCATAGGTGATGCATATCTGAAAAAGGCAGAATTTAACAGAGAGCCTCTGCCATTGAGGTTTAGATTGGCGGAATCCTTCTTCAAGCCTATTCTCAGCTGTGAGCCGTCAATAGCAACGCAGAAACTCCATCCTGACGATCACTTTCTCATATTTGCTTCGGACGGTTTGTGGGAGCACCTTAGCAACCAAGAAGCCGTTAACATGGTCAATAATAACCCACGTAATGGAATAGCGAGGAGGCTGGTAAAGGCAGCCATGAAAGAGGCAGCAAAGAAGAGGGAAATGAAACTGGCAGACCTGGAAAAGATCGAAGCAGGTGCGAGGAGGCACTTCCACGATGACATAACAGTAGTGGTTGTGTTTCTAAACCCAAAACTCACTGATAATAACTCTCCATGGGGCTCTCCTCTTTCAATCAAAGCAGGCTGGCCTGCCAATCCATAG 1119 0.4674 MVKSCWKPSVEGEDGEGSGKVDGLLWHKDLGNHLYGDFSMAVVQANSSLEDRSQLESGPFTCNNDNMGPQGTVIGVYDGHGGYEASQFVTDNLFSNLKRLAGEEGGMAESVIKKAYRATDEGFLSMVKRKWMSKPEIASTGTCCLVGIICNGMIYIANSGDSRAVLGRMERATKEVVAIQLSAEHNVNIETVRDEVRSKHPFDSQIVVLKHQVWRVKGLIQVSRSIGDAYLKKAEFNREPLPLRFRLAESFFKPILSCEPSIATQKLHPDDHFLIFASDGLWEHLSNQEAVNMVNNNPRNGIARRLVKAAMKEAAKKREMKLADLEKIEAGARRHFHDDITVVVVFLNPKLTDNNSPWGSPLSIKAGWPANP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5355g00003 372 Gene3D - 27 356 IPR036457 -
Pral5355g00003 372 SMART PP2C_4 31 345 IPR001932 -
Pral5355g00003 372 Pfam Protein phosphatase 2C 68 316 IPR001932 -
Pral5355g00003 372 ProSiteProfiles PPM-type phosphatase domain profile. 34 347 IPR001932 -
Pral5355g00003 372 CDD PP2Cc 35 347 IPR001932 -
Pral5355g00003 372 FunFam Phosphatase 2C family protein 26 357 - -
Pral5355g00003 372 SUPERFAMILY PP2C-like 47 348 IPR036457 -
Pral5355g00003 372 PANTHER PROTEIN PHOSPHATASE 27 345 IPR015655 GO:0004722|GO:0006470
Pral5355g00003 372 ProSitePatterns PPM-type phosphatase domain signature. 73 81 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5355g00003 Pral-Chr5355 17407 19568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5355g00003 1 367 PP2C-type Phosphatase Gene Family AT3G12620 62.432 4.12e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5355g00003 K01102 - gmx:100814123 585.489