Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5353g00025 ATGGACCTCCCCTTGTTTAACCGCTCTCAGCTGGAGCTCCTCCACCTGCCACATCCCCACTTATCCGGTCCCACCCTCGGCGAACTCCTCAAACGCGTCGATGATGCACAAAACGACACCCCTCCCCACCGTATACTCCACCTCGCTCCCCCTCCTTCCTCTTACCCATTCATTCTTTCCTTCACCAACTTAACTTACAGCGTCAAAGTCCACCGCAAAATGACCTCCCTCAAAAACCACGTCGTTTCGGAACATCGCAATGCCGGTAAGGGCACCAAGATTCTACTCAATAACATCTCAGGCGAGGCCAGAGACGGACAAATCATGGGCGTGCTCGGTGCCAGTGGGTCTGGCAAATCCACCCTCATCGATGCCCTCGCCGATCGAATCTCCAAGGACAGCTTAAAAGGCTCCGTCACCTTAAACGGTGAGGCTTTGGAGTCCAGACTTCTCAAGGTCATTTCCGCTTACGTCATGCAAGATGACCTTCTCTTCCCCATGCTCACAGTGGAAGAAACTCTCATGTTCTCCGCCGAGTTTCGCCTCCCTCGCTCCCTCTCTGCCTCAAAGAAGAAGGCCAGAGTCCAAGTACTCATTGACCAGCTCGGCCTCCGGAACGCAGCCAAAACAGTAATCGGAGATGAGGGCCACCGTGGCGTCTCCGGCGGTGAAAGGCGTCGAGTCTCTATCGGAATCGACATCATCCACGACCCGATCATTCTGTTCCTCGATGAACCTACTTCTGGACTGGATTCCACTAGCGCATTCATGGTTGTTAAGGTCTTGCAGCGAATCGCTCAGAGTGGGAGCATCGTCGTCATGTCCGTACACCAACCAAGTTATAGGATCCTCGGCTTATTAGATCGTTTGATTTTTCTCTCTCGTGGCCAAACCGTATATACCGGCTCTCCTGCGAATCTCCCGAGCTTCTTCTCGGAGTTCGGTCACCCGATACCCGAAGAGAACCGGACTGAGTTCGCACTGGATCTTATTCGTGAGCTCGAAGAATCACCAGGTGGGACCCAGAGTTTAGTGGAGTTCAACAAATCGTGGCAGTTAAATGCGGCGAAAAATAAACCAGCCACCAACCGATTCTTCACCGGAACTCTCAAGGACGCCATTGCCGCCAGCATTTCCAGAGGTAAATTAGTGTGCGGTGCACCGCATCATTCCAACGTCACCGCGTCGTCGGTTCCGAAATATGCTAATCCATTTTGGATGGAGATGATGGTGATAGCGAAACGATCGCTCACCAATTCCAGAAGAATGCCAGAACTATTCGGAATCCGACTCGGTGCGGTTCTCGTAACCGGAGGTATCTTAGCCACCATCTTCTGGCATCTGGATAATACTCCTAAAGGCGTTCAAGAACGCCTCGGTTTCTTCGCCTTCGCAATGTCCACCACCTTCTACACCTGCGCCGAGGCCTTCCCCGTCTTTCTCCAAGAGCGATACATCTTCATGAGAGAAACTGCTTACAATGCATACCGGCGTTGGTCCTACGTGCTAGCCCATTCCATAATCTCAATCCCCTCCTTGGCTGTCCTCTCTGCAGCATTCGCCGCCACCACATTCTGGTCGGTGGGTCTGGCCGGCGGGAGCTCCGGCTTCCTGTTCTACTTTCTCGTAATGTTCGCGTCCTTCTGGGCGGGAAGCTCCTTCGTGACGTTCCTATCGGGGATAGTGTCGCATGTGATGGGATTCACTGTGGTGGTGGCAATTCTAGCATACTTCCTTCTGTTCAGCGGATTCTTCATAAGCAGAGACAGGATGCCACTGTACTGGATATGGTTTCATTACATGTCGCTGGTGAAGTACCCGTACGAGGGGGTGTTGCAGAACGAGTTCGGGATGGAGCCGCCGAGGTGTTTTGTGAGGGGGACACAGATGTTCGACAACACGCTGGGGGAGGTGACGACGTCGTTGAAGGTGGAGTTGCTGAAGAGCATGAGCAAGACGCTGGGGATGAGCATAAACAGCGAGACGTGCGTGACCACGGGAGCCGATATACTGAGGCAGCAGGGGATTACGGAGCTCAGCAAGTGGGGATGCTTCTGGGTAACGCTTGCTTGGGGATTTTTCTTTAGGTTTTTGTTCTACTTGACGCTAGTGTTTGGAAGCAAGAACAAGAGGAGTTAA 2139 0.5288 MDLPLFNRSQLELLHLPHPHLSGPTLGELLKRVDDAQNDTPPHRILHLAPPPSSYPFILSFTNLTYSVKVHRKMTXSLKNHVVSEHRNAGKGTKILLNNISGEARDGQIMGVLGASGSGKSTLIDALADRISKDSLKGSVTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSASKKKARVQVLIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVVMSVHQPSYRILGLLDRLIFLSRGQTVYTGSPANLPSFFSEFGHPIPDXENRTEFALDLIRELEESPGGTQSLVEFNKSWQLNAAKNKPATNRFFTGTLKDAIAASISRGKLVCGAPHHSNVTASSVPKYANPFWMEMMVIAKRSLTNSRRMPELFGIRLGAVLVTGGILATIFWHLDNTPKGVQERLGFFAFAMSTTFYTCAEAFPVFLQERYIFMRETAYNAYRRWSYVLAHSIISIPSLAVLSAAFAATTFWSVGLAGGSSGFLFYFLVMFASFWAGSSFVTFLSGIVSHVMXGFTVVVAILAYFLLFSGFFISRDRMPLYWIWFHYMSLVKYPYEGVLQNEFGMEPPRCFVRGTQMFDNTPXGEVTTSLKVELLKSMSKTLGMSINSETCVTTGADILRQQGITELSKWGCFWVTLAWGFFFRFLFYLTLVFGSKNKRS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5353g00025 716 FunFam ABC transporter G family member 6 86 312 - -
Pral5353g00025 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 321 IPR003439 GO:0005524
Pral5353g00025 716 Pfam ABC-2 type transporter 411 619 IPR013525 GO:0016020|GO:0140359
Pral5353g00025 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 312 IPR027417 -
Pral5353g00025 716 Gene3D - 82 312 IPR027417 -
Pral5353g00025 716 SMART AAA_5 106 298 IPR003593 GO:0016887
Pral5353g00025 716 ProSitePatterns ABC transporters family signature. 221 235 IPR017871 GO:0005524|GO:0016887
Pral5353g00025 716 Pfam ABC transporter 97 249 IPR003439 GO:0005524
Pral5353g00025 716 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 44 704 - -
Pral5353g00025 716 Pfam ABC-2 type transporter 278 363 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5353g00025 Pral-Chr5353 150143 152343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5353g00025 96 281 Calmodulin-binding Proteins AT2G36910 29.630 1.23e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5353g00025 K05681 - gmx:100803426 1063.52